RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 GPHA2Q96T91 129 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 TSNAXQ99598 290 aaKnown RBP13.55□□□□□ -0.24
CCM2-205ENST00000472223 NAA60Q9H7X0 242 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 TNFRSF19Q9NS68 423 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 KIAA1456Q9P272 454 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 TCF19Q9Y242 345 aa13.55□□□□□ -0.24
CCM2-205ENST00000472223 TRAV6A0A075B6T7 132 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 FAM90A9PA6NNJ1 464 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 NCBP2LA6PVI3 153 aaKnown RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 H0Y980 276 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 RBFOX2O43251 390 aaKnown RBP eCLIP13.54□□□□□ -0.246e-11■■■■■ 38.6
CCM2-205ENST00000472223 CRYZL1O95825 349 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 HPRT1P00492 218 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 HRASP01112 189 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 IGHV4-59P01825 116 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 VAMP1P23763 118 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 LGALS7P47929 136 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 DHODHQ02127 395 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 EIF4EBP1Q13541 118 aaPredicted RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 TRIM16LQ309B1 348 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 C4orf46Q504U0 113 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 C16orf82Q7Z2V1 217 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 SLC25A42Q86VD7 318 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 DUSP18Q8NEJ0 188 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 OR8H1Q8NGG4 311 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 OSR1Q8TAX0 266 aaPredicted RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 EAF1Q96JC9 268 aaPredicted RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 FAM212BQ9NTI7 297 aaPredicted RBP13.54□□□□□ -0.24
CCM2-205ENST00000472223 VPREB3Q9UKI3 123 aa13.54□□□□□ -0.24
CCM2-205ENST00000472223 CRYM-AS1A6NIL9 109 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 DHFRP00374 187 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 RPA2P15927 270 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 LINC00205P59089 165 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 ERVK-16P61578 105 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 ADAD2Q8NCV1 583 aaKnown RBP13.53□□□□□ -0.24
CCM2-205ENST00000472223 DDB2Q92466 427 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 HARBI1Q96MB7 349 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 FLVCR2Q9UPI3 526 aa13.53□□□□□ -0.24
CCM2-205ENST00000472223 NSD1Q96L73 2696 aaPredicted RBP13.52□□□□□ -0.24
CCM2-205ENST00000472223 M0QZK8 103 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 PEX14O75381 377 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 CRYBA1P05813 215 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 LPAR6P43657 344 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 RAB25P57735 213 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 HILS1P60008 231 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 SRPXP78539 464 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 EBI3Q14213 229 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 PLGLAQ15195 96 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 MMDQ15546 238 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 VMA21Q3ZAQ7 101 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 SLC25A33Q9BSK2 321 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 PLEKHA2Q9HB19 425 aa13.52□□□□□ -0.25
CCM2-205ENST00000472223 SVEP1Q4LDE5 3571 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 MXRA5Q9NR99 2828 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 A6NDX4 124 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 DNAJC9-AS1A6NH13 148 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 CLDN34H7C241 214 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 TRIM77I1YAP6 450 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 OR2F2O95006 317 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 NQO2P16083 231 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 SLC9A3R2Q15599 337 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 TMEM177Q53S58 311 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 ZNF695Q8IW36 515 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 DMBX1Q8NFW5 382 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
CCM2-205ENST00000472223 VSTM2AQ8TAG5 236 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 PIFOQ8TCI5 191 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 ZFAND2BQ8WV99 257 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 RBM14Q96PK6 669 aaKnown RBP13.51□□□□□ -0.25
CCM2-205ENST00000472223 RASL11BQ9BPW5 248 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 ALX4Q9H161 411 aaPredicted RBP13.51□□□□□ -0.25
CCM2-205ENST00000472223 GPN1Q9HCN4 374 aaPredicted RBP13.51□□□□□ -0.25
CCM2-205ENST00000472223 COMMD9Q9P000 198 aa13.51□□□□□ -0.25
CCM2-205ENST00000472223 MTORP42345 2549 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 INMT-MINDY4F8WBC2 141 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 NBR2O15453 112 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 HLA-AP01891 365 aaKnown RBP13.5□□□□□ -0.25
CCM2-205ENST00000472223 IGKV1-16P04430 117 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 OR5AC1P0C628 307 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 OR4E1P0C645 316 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 ANXA7P20073 488 aaKnown RBP13.5□□□□□ -0.25
CCM2-205ENST00000472223 RAG2P55895 527 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 SP6Q3SY56 376 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 TMEM219Q86XT9 240 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 MINDY2Q8NBR6 621 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 GALNT14Q96FL9 552 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 DUX5Q96PT3 197 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 TP53RKQ96S44 253 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 MOB4Q9Y3A3 225 aa13.5□□□□□ -0.25
CCM2-205ENST00000472223 CREBL2O60519 120 aaPredicted RBP13.49□□□□□ -0.25
CCM2-205ENST00000472223 PRAF2O60831 178 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 RAMP3O60896 148 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 SPDEFO95238 335 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 SFT2D2O95562 160 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 PPP1R1AQ13522 171 aa13.49□□□□□ -0.25
CCM2-205ENST00000472223 CCBE1Q6UXH8 406 aaPredicted RBP13.49□□□□□ -0.25
CCM2-205ENST00000472223 LGI3Q8N145 548 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms