RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 S1PR2O95136 353 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 VENTXO95231 258 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 CRYZL1O95825 349 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 APOA2P02652 100 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 SNRNP70P08621 437 aaKnown RBP15.41■□□□□ 0.06
PSPC1-203ENST00000471658 HNF1AP20823 631 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 UCP1P25874 307 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 CBX3Q13185 183 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 HABP2Q14520 560 aaPredicted RBP15.41■□□□□ 0.06
PSPC1-203ENST00000471658 HNF4GQ14541 408 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 TEX29Q8N6K0 151 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 PIFOQ8TCI5 191 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 ZNF431Q8TF32 576 aaPredicted RBP15.41■□□□□ 0.06
PSPC1-203ENST00000471658 WASHC3Q9Y3C0 194 aa15.41■□□□□ 0.06
PSPC1-203ENST00000471658 FAM90A9PA6NNJ1 464 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 PRAF2O60831 178 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 IGKV1D-33P01593 117 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 IGKV1-33P01594 117 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 RPA2P15927 270 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 CD1BP29016 333 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 MC5RP33032 325 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 LIAT1Q6ZQX7 453 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 SSX3Q99909 188 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 MXRA5Q9NR99 2828 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 F8P00451 2351 aa15.4■□□□□ 0.06
PSPC1-203ENST00000471658 A0A1B0GVG6 124 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 SRRM4A7MD48 611 aaKnown RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 SERPINE2P07093 398 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 ANXA3P12429 323 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 RTL8BQ17RB0 113 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 PDPNQ86YL7 162 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 SELENOHQ8IZQ5 122 aaKnown RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 UXS1Q8NBZ7 420 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 DUS4LO95620 317 aaKnown RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 CDS2O95674 445 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 CNTFRP26992 372 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 KIR2DS2P43631 304 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 HES1Q14469 280 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 TMEM268Q5VZI3 342 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 C11orf88Q6PI97 169 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 VKORC1L1Q8N0U8 176 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 OR4S2Q8NH73 311 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 MITD1Q8WV92 249 aa15.39■□□□□ 0.05
PSPC1-203ENST00000471658 FLYWCH2Q96CP2 140 aaKnown RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 EAF1Q96JC9 268 aaPredicted RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 GPN1Q9HCN4 374 aaPredicted RBP15.39■□□□□ 0.05
PSPC1-203ENST00000471658 HIVEP2P31629 2446 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 C7orf66A4D0T2 115 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 VGLL3A8MV65 326 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 RBFOX2O43251 390 aaKnown RBP eCLIP15.38■□□□□ 0.05
PSPC1-203ENST00000471658 RRASP10301 218 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 BRS3P32247 399 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 RPS16P62249 146 aaKnown RBP15.38■□□□□ 0.05
PSPC1-203ENST00000471658 TAGLNQ01995 201 aaKnown RBP15.38■□□□□ 0.05
PSPC1-203ENST00000471658 TMEM177Q53S58 311 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 TCTEX1D1Q8N7M0 179 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 CD300LFQ8TDQ1 290 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 ZDHHC16Q969W1 377 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 TMEM56Q96MV1 263 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 OR51J1Q9H342 316 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 TMEM56-RWDD3S4R434 201 aa15.38■□□□□ 0.05
PSPC1-203ENST00000471658 H3BUX3 64 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 HPRT1P00492 218 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 ARHGDIBP52566 201 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 C2orf68Q2NKX9 166 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 LRRC75BQ2VPJ9 315 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 SSX9Q7RTT3 188 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 LYZL2Q7Z4W2 148 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 ZNF695Q8IW36 515 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 C12orf45Q8N5I9 185 aaPredicted RBP15.37■□□□□ 0.05
PSPC1-203ENST00000471658 SIGLECL1Q8N7X8 197 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 CDC42EP3Q9UKI2 254 aa15.37■□□□□ 0.05
PSPC1-203ENST00000471658 SNRPGP15A8MWD9 76 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 SHOXO15266 292 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 CREBL2O60519 120 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-203ENST00000471658 B3GALNT1O75752 331 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 MOSP00540 346 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 KRASP01116 189 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 IGKV1-5P01602 117 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 IGHV4-59P01825 116 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 G6PCP35575 357 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 DYNLT3P51808 116 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 F2RL1P55085 397 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 EBI3Q14213 229 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 LY6EQ16553 131 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 TUSC1Q2TAM9 212 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 DHRS7BQ6IAN0 325 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-203ENST00000471658 Q6YL49 198 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 LGI3Q8N145 548 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 HARBI1Q96MB7 349 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 PLEKHA2Q9HB19 425 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 TNFRSF19Q9NS68 423 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 FAM212BQ9NTI7 297 aaPredicted RBP15.36■□□□□ 0.05
PSPC1-203ENST00000471658 NAV3Q8IVL0 2385 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 MAST4O15021 2626 aa15.36■□□□□ 0.05
PSPC1-203ENST00000471658 hCG_2014768A0A024R1R8 64 aa15.35■□□□□ 0.05
PSPC1-203ENST00000471658 ADAP1O75689 374 aa15.35■□□□□ 0.05
PSPC1-203ENST00000471658 HOXB5P09067 269 aa15.35■□□□□ 0.05
PSPC1-203ENST00000471658 FAM106CPP0CH98 169 aa15.35■□□□□ 0.05
PSPC1-203ENST00000471658 SRD5A1P18405 259 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms