RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 PEAK1Q9H792 1746 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF646O15015 1829 aaPredicted RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 LAMA4Q16363 1823 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 DOCK2Q92608 1830 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF727A8MUV8 499 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GGTLC3B5MD39 225 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 NPIPB11E5RHQ5 1161 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM262E9PQX1 116 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C17orf112F2Z3M2 114 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 TAPBPO15533 448 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 EDIL3O43854 480 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 RENP00797 406 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 IGHMP01871 453 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 CATP04040 527 aaKnown RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GYPEP15421 78 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GATA1P15976 413 aaPredicted RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GPX3P22352 226 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 OPRM1P35372 400 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 DAPP51397 102 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 SSR4P51571 173 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C1DQ13901 141 aaKnown RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 CD226Q15762 336 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 CSRP2Q16527 193 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C2orf68Q2NKX9 166 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 MPV17L2Q567V2 206 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ENTPD8Q5MY95 495 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF880Q6PDB4 577 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 LCN15Q6UWW0 184 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 Q6ZRG5 221 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 SHISA6Q6ZSJ9 500 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ATOH7Q8N100 152 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C10orf111Q8N326 155 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GPD1LQ8N335 351 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 METTL27Q8N6F8 245 aaPredicted RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GJC3Q8NFK1 279 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 OR11H6Q8NGC7 330 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 OR10P1Q8NGE3 313 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GEMIN6Q8WXD5 167 aaKnown RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 ARPC1AQ92747 370 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 NEURL3Q96EH8 262 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 Q96MF0 132 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 AP1S3Q96PC3 154 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 AGMATQ9BSE5 352 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C1QTNF5Q9BXJ0 243 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 C5orf66Q9H5L9 145 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 VSIRQ9H7M9 311 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 COMMD9Q9P000 198 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 WASHC3Q9Y3C0 194 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 LAMB2P55268 1798 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 LOXHD1Q8IVV2 1947 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 RICTORQ6R327 1708 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 SLIT2O94813 1529 aa4.26□□□□□ -1.73
COL3A1-205ENST00000470167 GOLGB1Q14789 3259 aaKnown RBP4.26□□□□□ -1.73
COL3A1-205ENST00000470167 COL16A1Q07092 1604 aaPredicted RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 RGPD2P0DJD1 1756 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TRAV9-2A0A087WT02 112 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 SAA2-SAA4A0A096LPE2 208 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TMED7-TICAM2A0A0A6YYA0 188 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TRAV5A0A0B4J249 113 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 MUC21A0A0G2JKD1 596 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 MUC21A0A140T8X8 626 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 A0A1W2PPM0 123 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 DAPL1A0PJW8 107 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 ARRDC5A6NEK1 342 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 OR4C45A6NMZ5 311 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 PRSS46E5RG02 174 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM178BH3BS89 294 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 HSPB6O14558 160 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 GNGT2O14610 69 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 SOCS1O15524 211 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 CLDN14O95500 239 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 SLC2A10O95528 541 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 NCR2O95944 276 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 GASTP01350 101 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 IGF1P05019 195 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 H1F0P07305 194 aaKnown RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 PRPH2P23942 346 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 PLA2G5P39877 138 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 RPL13AP40429 203 aaKnown RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 VDAC2P45880 294 aaPredicted RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 NMUP48645 174 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 LINC00310P59036 64 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 RPS14P62263 151 aaKnown RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 GNB2P62879 340 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 FKBP1BP68106 108 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 SLC38A11Q08AI6 406 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 ZNF141Q15928 474 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 IGFBP7Q16270 282 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 ACSF3Q4G176 576 aaPredicted RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TECRLQ5HYJ1 363 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 VAX1Q5SQQ9 334 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 MUC21Q5SSG8 566 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 FAM166AQ6J272 317 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 SLC25A47Q6Q0C1 308 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 AMTNQ6UX39 209 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 HRCT1Q6UXD1 115 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM64Q6YI46 380 aa4.25□□□□□ -1.73
COL3A1-205ENST00000470167 BCDIN3DQ7Z5W3 292 aaKnown RBP4.25□□□□□ -1.73
COL3A1-205ENST00000470167 TMEM179BQ7Z7N9 219 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms