RNA–Protein interactions for RNA: ENST00000470115.1

GTF3C2-209, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-209ENST00000470115 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
GTF3C2-209ENST00000470115 SCGNO76038 276 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 SPDEFO95238 335 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF182P17025 639 aaPredicted RBP12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 DTYMKP23919 212 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 DGCR2P98153 550 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 ACTBL2Q562R1 376 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 UBE2NLQ5JXB2 153 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 HACD4Q5VWC8 232 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 MZT2AQ6P582 158 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 UNQ5815/PRO19632Q6UWF5 114 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 H1FOOQ8IZA3 346 aaPredicted RBP12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 TCTEX1D1Q8N7M0 179 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 LFNGQ8NES3 379 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 ACOT12Q8WYK0 555 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 DNAH9Q9NYC9 4486 aa12.72□□□□□ -0.37
GTF3C2-209ENST00000470115 SEC14L6B5MCN3 397 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 ARPC1BO15143 372 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 IGLV2-23P01705 113 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 LGALS7P47929 136 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 ZNF616Q08AN1 781 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 PJVKQ0ZLH3 352 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 C9orf66Q5T8R8 295 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 ASPHD1Q5U4P2 390 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 BVESQ8NE79 360 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 SLC25A38Q96DW6 304 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 ALX4Q9H161 411 aaPredicted RBP12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 DIABLOQ9NR28 239 aa12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
GTF3C2-209ENST00000470115 TMEM235A6NFC5 223 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 J3QRK9 145 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 OR8U8P0C7N1 319 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 TAGLNQ01995 201 aaKnown RBP12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 FXYD3Q14802 87 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 GRPEL2Q8TAA5 225 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 ARPC1AQ92747 370 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 MS4A10Q96PG2 267 aa12.7□□□□□ -0.38
GTF3C2-209ENST00000470115 TRAV18A0A075B6X5 111 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 SMIM31A0A1B0GVY4 71 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 SRRM4A7MD48 611 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 SHOXO15266 292 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 RGS5O15539 181 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 SSX5O60225 188 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 HPGDSO60760 199 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 CNIH1O95406 144 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 CRYGBP07316 175 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 SSBP2P81877 361 aaPredicted RBP12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 CBX3Q13185 183 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 RTL8BQ17RB0 113 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 ZNF260Q3ZCT1 412 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 TMEM177Q53S58 311 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 DYNC2LI1Q8TCX1 351 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 HARBI1Q96MB7 349 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 RBM38Q9H0Z9 239 aaKnown RBP12.69□□□□□ -0.38
GTF3C2-209ENST00000470115 DPPA5A6NC42 116 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 LINC00473A8K010 186 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 RAMP3O60896 148 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 IGHV3-11P01762 117 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 EIF4EP06730 217 aaKnown RBP12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 RRASP10301 218 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 NFYAP23511 347 aaPredicted RBP12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 DUTP33316 252 aaKnown RBP12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 GNG2P59768 71 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 PITPNAQ00169 270 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 TMEM69Q5SWH9 247 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 PYHIN1Q6K0P9 492 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 DCUN1D4Q92564 292 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 C6orf62Q9GZU0 229 aaPredicted RBP12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 CCDC59Q9P031 241 aaKnown RBP12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 NDUFA13Q9P0J0 144 aa12.68□□□□□ -0.38
GTF3C2-209ENST00000470115 LINC01619G3V211 115 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 LGALS1P09382 135 aaKnown RBP12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 CTXN2P0C2S0 81 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 CD40LGP29965 261 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 ECI1P42126 302 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 TPPP2P59282 170 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 CNIH2Q6PI25 160 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 OR5T1Q8NG75 326 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 DDB2Q92466 427 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 DLX4Q92988 240 aaPredicted RBP12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 ADTRPQ96IZ2 230 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 PRR25Q96S07 402 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 OR2W1Q9Y3N9 320 aa12.67□□□□□ -0.38
GTF3C2-209ENST00000470115 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 A0A087WW49 117 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 A0A0A6YYH2 397 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 A6NJ64 397 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 ZNF701M0R085 212 aaPredicted RBP12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 OVOL1O14753 267 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 CRYZL1O95825 349 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 HLA-DQB1P01920 261 aa12.66□□□□□ -0.38
GTF3C2-209ENST00000470115 APOA1P02647 267 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms