RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 HSD17B13Q7Z5P4 300 aaPredicted RBP14.35□□□□□ -0.11
MRPL28-208ENST00000469744 BAP18Q8IXM2 172 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 OR5D13Q8NGL4 314 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 LHFPL5Q8TAF8 219 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 RBPMSQ93062 196 aaKnown RBP14.35□□□□□ -0.11
MRPL28-208ENST00000469744 TOLLIPQ9H0E2 274 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 KPTNQ9Y664 436 aa14.35□□□□□ -0.11
MRPL28-208ENST00000469744 A0A0U1RQK1 487 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 A0A1W2PRD5 423 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 A0A1W2PRF3 423 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 A0A1W2PRM7 423 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 MSGN1A6NI15 193 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 OMGP23515 440 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 BPIFB3P59826 476 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 FOXL1Q12952 345 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 TMEM268Q5VZI3 342 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 Q6YL49 198 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 ZNF695Q8IW36 515 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 SELENOHQ8IZQ5 122 aaKnown RBP14.34□□□□□ -0.11
MRPL28-208ENST00000469744 FAM71E2Q8N5Q1 922 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 Q8N7P7 452 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 OR10V1Q8NGI7 309 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 OR4D5Q8NGN0 318 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 C8orf46Q8TAG6 207 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 PCNPQ8WW12 178 aaKnown RBP14.34□□□□□ -0.11
MRPL28-208ENST00000469744 PRDM13Q9H4Q3 707 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 CCL28Q9NRJ3 127 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 SDHAF2Q9NX18 166 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 KCNIP1Q9NZI2 227 aa14.34□□□□□ -0.11
MRPL28-208ENST00000469744 K7EPK0 472 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 SHOXO15266 292 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 GPR37O15354 613 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 ST8SIA3O43173 380 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 PGLYRP1O75594 196 aaPredicted RBP14.33□□□□□ -0.12
MRPL28-208ENST00000469744 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
MRPL28-208ENST00000469744 GAPDHP04406 335 aaKnown RBP14.33□□□□□ -0.12
MRPL28-208ENST00000469744 RPL12P30050 165 aaKnown RBP14.33□□□□□ -0.12
MRPL28-208ENST00000469744 MSMO1Q15800 293 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 TOR2AQ5JU69 321 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 PIP4P2Q8N4L2 257 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 SLC35G3Q8N808 338 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 SESN1Q9Y6P5 492 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 PKD1L1Q8TDX9 2849 aa14.33□□□□□ -0.12
MRPL28-208ENST00000469744 FAM181BA6NEQ2 426 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 RNASEK-C17orf49H0YIS7 233 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 HSD17B6O14756 317 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 FGF16O43320 207 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 F2RP25116 425 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 P2RY1P47900 373 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 EIF5AL1Q6IS14 154 aaKnown RBP14.32□□□□□ -0.12
MRPL28-208ENST00000469744 TRAT1Q6PIZ9 186 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 C5orf24Q7Z6I8 188 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 PNKDQ8N490 385 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 CD177Q8N6Q3 437 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 KIR3DL3Q8N743 410 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 CXorf58Q96LI9 332 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 OR14J1Q9UGF5 321 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 POMT1Q9Y6A1 747 aa14.32□□□□□ -0.12
MRPL28-208ENST00000469744 I3L521 148 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 SLC25A6P12236 298 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 VDAC1P21796 283 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 ZBTB34Q8NCN2 500 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 SDSLQ96GA7 329 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 TAF9BQ9HBM6 251 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 LSM5Q9Y4Y9 91 aaKnown RBP14.31□□□□□ -0.12
MRPL28-208ENST00000469744 MGAM2Q2M2H8 2515 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 GPR137BO60478 399 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 PSPNO60542 156 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 IGHV4-59P01825 116 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 FGF2P09038 288 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 MDKP21741 143 aaPredicted RBP14.31□□□□□ -0.12
MRPL28-208ENST00000469744 THOC7Q6I9Y2 204 aaKnown RBP14.31□□□□□ -0.12
MRPL28-208ENST00000469744 UNKLQ9H9P5 680 aaKnown RBP14.31□□□□□ -0.12
MRPL28-208ENST00000469744 C19orf12Q9NSK7 152 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 OR1A1Q9P1Q5 309 aa14.31□□□□□ -0.12
MRPL28-208ENST00000469744 KCNAB3O43448 404 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 JTBO76095 146 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 PRDX2P32119 198 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 OR3A1P47881 315 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 NMSQ5H8A3 153 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 PPP1R35Q8TAP8 253 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 SSMEM1Q8WWF3 244 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 TNFRSF14Q92956 283 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 C11orf1Q9H5F2 150 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 ZC4H2Q9NQZ6 224 aa14.3□□□□□ -0.12
MRPL28-208ENST00000469744 NUDT19A8MXV4 375 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 HSPA12AO43301 675 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 SCGB1D2O95969 90 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 FOXRED2Q8IWF2 684 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 CCDC28AQ8IWP9 274 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 OR52M1Q8NGK5 317 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 RNF141Q8WVD5 230 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 IL1F10Q8WWZ1 152 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 GALMQ96C23 342 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 ZNF747Q9BV97 191 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 NCOR1P1Q9H4R4 102 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 FAM96BQ9Y3D0 163 aa14.29□□□□□ -0.12
MRPL28-208ENST00000469744 KRBOX1C9JBD0 128 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 NPFFO15130 113 aa14.28□□□□□ -0.12
MRPL28-208ENST00000469744 PVALBP20472 110 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms