RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 SNAPC3Q92966 411 aa9.28□□□□□ -0.92
COL5A1-207ENST00000469093 PECRQ9BY49 303 aa9.28□□□□□ -0.92
COL5A1-207ENST00000469093 SDHAF2Q9NX18 166 aa9.28□□□□□ -0.92
COL5A1-207ENST00000469093 COA4Q9NYJ1 87 aa9.28□□□□□ -0.92
COL5A1-207ENST00000469093 LSM2Q9Y333 95 aaKnown RBP9.28□□□□□ -0.92
COL5A1-207ENST00000469093 CSMD3Q7Z407 3707 aa9.28□□□□□ -0.92
COL5A1-207ENST00000469093 A0A087WXM4 84 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 SHISA3A0PJX4 238 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 ZNF785A8K8V0 405 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 SLC17A2O00624 439 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 OR2A4O95047 310 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 SERPINB10P48595 397 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 MED22Q15528 200 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 C2orf76Q3KRA6 126 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 ZNF773Q6PK81 442 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 TMEM91Q6ZNR0 172 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 ADAD2Q8NCV1 583 aaKnown RBP9.27□□□□□ -0.93
COL5A1-207ENST00000469093 OR4A4PQ8NGN8 299 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 IL17DQ8TAD2 202 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 FCGR1BQ92637 280 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 TMEM203Q969S6 136 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 C5orf30Q96GV9 206 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 HARBI1Q96MB7 349 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 PLEKHA3Q9HB20 300 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 PLGRKTQ9HBL7 147 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 KCNK7Q9Y2U2 307 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 AK6Q9Y3D8 172 aaKnown RBP9.27□□□□□ -0.93
COL5A1-207ENST00000469093 CEPT1Q9Y6K0 416 aa9.27□□□□□ -0.93
COL5A1-207ENST00000469093 SHOXO15266 292 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 FABP7O15540 132 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 JTBO76095 146 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 GSTT2P0CG29 244 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 GSTT2BP0CG30 244 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 HSMCR30P0CW71 290 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 CLDN12P56749 244 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 TAGLNQ01995 201 aaKnown RBP9.26□□□□□ -0.93
COL5A1-207ENST00000469093 TBCEQ15813 527 aaPredicted RBP9.26□□□□□ -0.93
COL5A1-207ENST00000469093 PRSS8Q16651 343 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 CD300EQ496F6 205 aaPredicted RBP9.26□□□□□ -0.93
COL5A1-207ENST00000469093 IGSF11Q5DX21 431 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 ZNF367Q7RTV3 350 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 TSPAN14Q8NG11 270 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 OR2K2Q8NGT1 345 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 PHB2Q99623 299 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 FAM110AQ9BQ89 295 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 OR2D2Q9H210 308 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 AKIP1Q9NQ31 210 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 PEMTQ9UBM1 199 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 STARD9Q9P2P6 4700 aa9.26□□□□□ -0.93
COL5A1-207ENST00000469093 TRBV6-7A0A0A0MS04 114 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 A0A0B4J203 849 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
COL5A1-207ENST00000469093 BMPR1BO00238 502 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 BET1O15155 118 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 AIREO43918 545 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 PRH1P02810 166 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 CD7P09564 240 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 OR9G9P0C7N8 305 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
COL5A1-207ENST00000469093 MAP2K4P45985 399 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 CD81P60033 236 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RHOGP84095 191 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 PLA2G7Q13093 441 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 IRF3Q14653 427 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RAB11BQ15907 218 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RTL8BQ17RB0 113 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 LIPKQ5VXJ0 399 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 TEX45Q8NA69 505 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 OR56B1Q8NGI3 324 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 OR10J5Q8NHC4 309 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 DDB2Q92466 427 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 UFD1Q92890 307 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 FAM3DQ96BQ1 224 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 NEURL2Q9BR09 285 aa9.25□□□□□ -0.93
COL5A1-207ENST00000469093 ZNF230Q9UIE0 474 aaPredicted RBP9.25□□□□□ -0.93
COL5A1-207ENST00000469093 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.24□□□□□ -0.93
COL5A1-207ENST00000469093 TRBV9A0A0B4J1U6 114 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 TPPPO94811 219 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 RRASP10301 218 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 PSMB9P28065 219 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 UBE2KP61086 200 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 ZNF45Q02386 682 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 CBX3Q13185 183 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 TNXAQ16473 311 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 DEFB114Q30KQ6 69 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 VMA21Q3ZAQ7 101 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 IDO2Q6ZQW0 420 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 LAX1Q8IWV1 398 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 SPARTQ8N0X7 666 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 SRSF12Q8WXF0 261 aaKnown RBP9.24□□□□□ -0.93
COL5A1-207ENST00000469093 CABLES2Q9BTV7 478 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 ACOT13Q9NPJ3 140 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 SLC2A8Q9NY64 477 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
COL5A1-207ENST00000469093 TMEM272A0A1B0GTI8 110 aa9.23□□□□□ -0.93
COL5A1-207ENST00000469093 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms