RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SVEP1Q4LDE5 3571 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 PTPRSQ13332 1948 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 SDK1Q7Z5N4 2213 aa2.52□□□□□ -2.01
LSM5-209ENST00000468872 KTN1Q86UP2 1357 aaKnown RBP2.51□□□□□ -2.01
LSM5-209ENST00000468872 IGKV2-24A0A0C4DH68 120 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 GOLGA6L10A6NI86 522 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 F5H5P2 479 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 SULT1C2O00338 296 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 FGF16O43320 207 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 CYTH3O43739 400 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 CGB3P0DN86 165 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 CGB7P0DN87 165 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 CNTFRP26992 372 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 ELK4P28324 431 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 TGFBR2P37173 567 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 RAB31Q13636 194 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 SLC9A3R2Q15599 337 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 BCL2A1Q16548 175 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 PDZD11Q5EBL8 140 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 NXNL2Q5VZ03 156 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 LAMTOR1Q6IAA8 161 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 WDR59Q6PJI9 974 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
LSM5-209ENST00000468872 C10orf107Q8IVU9 208 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 ZIC4Q8N9L1 334 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 GATD1Q8NB37 220 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 ACTL9Q8TC94 416 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 MAL2Q969L2 176 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 TENM2Q9NT68 2774 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 ATG2BQ96BY7 2078 aa2.51□□□□□ -2.01
LSM5-209ENST00000468872 SEC16AO15027 2179 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 A0A0A6YYH2 397 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 GOLGA8IPA6NC78 632 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 A6NJ64 397 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ZNF729A6NN14 1252 aaPredicted RBP2.5□□□□□ -2.01
LSM5-209ENST00000468872 A8MWP4 228 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 K7ERS5 55 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 LIN7AO14910 233 aaPredicted RBP2.5□□□□□ -2.01
LSM5-209ENST00000468872 MPZL2O60487 215 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 AHSA1O95433 338 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 IGKV1D-33P01593 117 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 IGKV1-33P01594 117 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 GTF2F2P13984 249 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 CD34P28906 385 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ZNF83P51522 516 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 RAB25P57735 213 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ITGB3BPQ13352 177 aaPredicted RBP2.5□□□□□ -2.01
LSM5-209ENST00000468872 COQ5Q5HYK3 327 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 NIPAL1Q6NVV3 410 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 DGAT2L6Q6ZPD8 337 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 FAM183BPQ6ZVS7 135 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 PAGE2Q7Z2X7 111 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ZNF664Q8N3J9 261 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 C2orf73Q8N5S3 287 aaPredicted RBP2.5□□□□□ -2.01
LSM5-209ENST00000468872 ACBD4Q8NC06 268 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 DYNC2LI1Q8TCX1 351 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ANKRD7Q92527 254 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 OTUB2Q96DC9 234 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 PGLYRP3Q96LB9 341 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 TAPBPLQ9BX59 468 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ASCL3Q9NQ33 180 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ZNF391Q9UJN7 358 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 TRAPPC1Q9Y5R8 145 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 MIA3Q5JRA6 1907 aa2.5□□□□□ -2.01
LSM5-209ENST00000468872 ABCA13Q86UQ4 5058 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 GREB1Q4ZG55 1949 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 IGHV2-26A0A0B4J1V2 119 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 A0A1W2PRG6 482 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 C15orf65H3BRN8 121 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 FABP7O15540 132 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 CRXO43186 299 aaPredicted RBP2.49□□□□□ -2.01
LSM5-209ENST00000468872 TCF21O43680 179 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 ORM1P02763 201 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 P0C880 135 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 LIMS3P0CW19 117 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 LIMS4P0CW20 117 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 MRPS15P82914 257 aaKnown RBP2.49□□□□□ -2.01
LSM5-209ENST00000468872 FLOT2Q14254 428 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 GOLGA7BQ2TAP0 167 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 TMEM249Q2WGJ8 235 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 DEFB134Q4QY38 66 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 CLEC20AQ6ZU45 233 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 SSX7Q7RTT5 188 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 OR5AK3PQ8NH89 298 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 FAM45AQ8TCE6 357 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 TVP23CQ96ET8 276 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 FAM210AQ96ND0 272 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 DSN1Q9H410 356 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 ASF1BQ9NVP2 202 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 PLEKHJ1Q9NW61 149 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 PATJQ8NI35 1801 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 SHANK1Q9Y566 2161 aa2.49□□□□□ -2.01
LSM5-209ENST00000468872 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 HIVEP2P31629 2446 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 PSME4Q14997 1843 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 FAM183AA6NL82 134 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 LEUTXA8MZ59 168 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 GOLGA8KD6RF30 607 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 GOLGA8MH3BSY2 632 aa2.48□□□□□ -2.01
LSM5-209ENST00000468872 I3L4J1 428 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms