RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CNBD2Q96M20 576 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 ELOVL1Q9BW60 279 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 NDUFB11Q9NX14 153 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 STUB1Q9UNE7 303 aa18.72■□□□□ 0.59
PTCH1-210ENST00000468211 LINC00473A8K010 186 aa18.71■□□□□ 0.59
PTCH1-210ENST00000468211 DIRAS3O95661 229 aa18.71■□□□□ 0.59
PTCH1-210ENST00000468211 TRBV12-3P01733 135 aa18.71■□□□□ 0.59
PTCH1-210ENST00000468211 RAB6AP20340 208 aa18.71■□□□□ 0.59
PTCH1-210ENST00000468211 KLF5Q13887 457 aaPredicted RBP18.71■□□□□ 0.59
PTCH1-210ENST00000468211 IZUMO2Q6UXV1 221 aa18.71■□□□□ 0.59
PTCH1-210ENST00000468211 H1FOOQ8IZA3 346 aaPredicted RBP18.71■□□□□ 0.59
PTCH1-210ENST00000468211 TINAGL1Q9GZM7 467 aaPredicted RBP18.71■□□□□ 0.59
PTCH1-210ENST00000468211 A0A0G2JLM5 398 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 TRDV1A0A1B0GX56 115 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 SMIM30A4D0T7 59 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 ZP3P21754 424 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 GADD45AP24522 165 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 DUTP33316 252 aaKnown RBP18.7■□□□□ 0.58
PTCH1-210ENST00000468211 RANBP1P43487 201 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 DYRK1AQ13627 763 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 RTL8BQ17RB0 113 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 CASC10Q5T4H9 136 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 IDO2Q6ZQW0 420 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 GINS4Q9BRT9 223 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 TENM2Q9NT68 2774 aa18.7■□□□□ 0.58
PTCH1-210ENST00000468211 MSGN1A6NI15 193 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 BRI3O95415 125 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 IGHV4-30-4P0DP06 118 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 RAB3BP20337 219 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 ARFRP1Q13795 201 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 C22orf42Q6IC83 251 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 ANKRD13BQ86YJ7 626 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 COA4Q9NYJ1 87 aa18.69■□□□□ 0.58
PTCH1-210ENST00000468211 RBM7Q9Y580 266 aaKnown RBP18.69■□□□□ 0.58
PTCH1-210ENST00000468211 CRYZL1O95825 349 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 MYL9P24844 172 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 SYNJ2BPP57105 145 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 TAGLNQ01995 201 aaKnown RBP18.68■□□□□ 0.58
PTCH1-210ENST00000468211 ZNF343Q6P1L6 599 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 Q6ZS49 121 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 TMEM68Q96MH6 324 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 RYR2Q92736 4967 aa18.68■□□□□ 0.58
PTCH1-210ENST00000468211 J3QRK9 145 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 TALDO1P37837 337 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 CBX3Q13185 183 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 TNXAQ16473 311 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 PRSS8Q16651 343 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 ADAD2Q8NCV1 583 aaKnown RBP18.67■□□□□ 0.58
PTCH1-210ENST00000468211 OR9G4Q8NGQ1 327 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 TM2D3Q9BRN9 247 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 ATG5Q9H1Y0 275 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 C19orf73Q9NVV2 129 aa18.67■□□□□ 0.58
PTCH1-210ENST00000468211 PEF1Q9UBV8 284 aaKnown RBP18.67■□□□□ 0.58
PTCH1-210ENST00000468211 METTL21EPA6NDL7 271 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 RRASP10301 218 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 UBE2KP61086 200 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 TEX45Q8NA69 505 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 PHB2Q99623 299 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 ZMAT4Q9H898 229 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 CSMD3Q7Z407 3707 aa18.66■□□□□ 0.58
PTCH1-210ENST00000468211 PRH1P02810 166 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 AADACP22760 399 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 VMA21Q3ZAQ7 101 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 CDNFQ49AH0 187 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 SRSF12Q8WXF0 261 aaKnown RBP18.65■□□□□ 0.58
PTCH1-210ENST00000468211 ADTRPQ96IZ2 230 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 BLOC1S6Q9UL45 172 aa18.65■□□□□ 0.58
PTCH1-210ENST00000468211 CSN3P07498 182 aa18.64■□□□□ 0.57
PTCH1-210ENST00000468211 HSPA13P48723 471 aa18.64■□□□□ 0.57
PTCH1-210ENST00000468211 USMG5Q96IX5 58 aa18.64■□□□□ 0.57
PTCH1-210ENST00000468211 VCX3BQ9H321 246 aa18.64■□□□□ 0.57
PTCH1-210ENST00000468211 ZNF430Q9H8G1 570 aaPredicted RBP18.64■□□□□ 0.57
PTCH1-210ENST00000468211 A8MZ25 164 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 OR9G9P0C7N8 305 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 SAA1P0DJI8 122 aaPredicted RBP18.63■□□□□ 0.57
PTCH1-210ENST00000468211 DTYMKP23919 212 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 RPL30P62888 115 aaKnown RBP18.63■□□□□ 0.57
PTCH1-210ENST00000468211 ZNF45Q02386 682 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 C10orf55Q5SWW7 151 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 ACOT12Q8WYK0 555 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 THAP7Q9BT49 309 aaPredicted RBP18.63■□□□□ 0.57
PTCH1-210ENST00000468211 ST6GALNAC5Q9BVH7 336 aa18.63■□□□□ 0.57
PTCH1-210ENST00000468211 STARD9Q9P2P6 4700 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 IZUMO1RA6ND01 250 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 IGLV2-14P01704 120 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 GALP22466 123 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 NFYAP23511 347 aaPredicted RBP18.62■□□□□ 0.57
PTCH1-210ENST00000468211 SGPP2Q8IWX5 399 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 OSR1Q8TAX0 266 aaPredicted RBP18.62■□□□□ 0.57
PTCH1-210ENST00000468211 NUDCD2Q8WVJ2 157 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 CITED4Q96RK1 184 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 AKIP1Q9NQ31 210 aa18.62■□□□□ 0.57
PTCH1-210ENST00000468211 GAR1Q9NY12 217 aaKnown RBP18.62■□□□□ 0.57
PTCH1-210ENST00000468211 SACSQ9NZJ4 4579 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 IGKV1D-13A0A0B4J2D9 117 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 IGKV1-13P0DP09 117 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 RHOGP84095 191 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 OR2B11Q5JQS5 317 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 HACD4Q5VWC8 232 aa18.61■□□□□ 0.57
PTCH1-210ENST00000468211 ZNF645Q8N7E2 425 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms