RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 OR1N2Q8NGR9 330 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 FLYWCH2Q96CP2 140 aaKnown RBP14.85□□□□□ -0.03
COL7A1-207ENST00000467985 DIABLOQ9NR28 239 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 NUBP2Q9Y5Y2 271 aa14.85□□□□□ -0.03
COL7A1-207ENST00000467985 A0A1W2PN81 502 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 SEC14L6B5MCN3 397 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 FCN1O00602 326 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 HPGDSO60760 199 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 OR8U9P0C7N5 309 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 CD40LGP29965 261 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 CHRNA7P36544 502 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 ZNF616Q08AN1 781 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 CBX3Q13185 183 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 PPP1R27Q86WC6 154 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 S100A16Q96FQ6 103 aaKnown RBP14.84□□□□□ -0.03
COL7A1-207ENST00000467985 GINS4Q9BRT9 223 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 SLIRPQ9GZT3 109 aaKnown RBP14.84□□□□□ -0.03
COL7A1-207ENST00000467985 OR2D2Q9H210 308 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 GNB4Q9HAV0 340 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL7A1-207ENST00000467985 FBXO7Q9Y3I1 522 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 A3GALT2U3KPV4 340 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 TENM3Q9P273 2699 aa14.84□□□□□ -0.03
COL7A1-207ENST00000467985 EGR2P11161 476 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-207ENST00000467985 DTYMKP23919 212 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 S100A5P33763 92 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 LGALS7P47929 136 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 LUMP51884 338 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-207ENST00000467985 ACTBL2Q562R1 376 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 SLC25A38Q96DW6 304 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 SLC35D1Q9NTN3 355 aa14.83□□□□□ -0.04
COL7A1-207ENST00000467985 ZNF230Q9UIE0 474 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-207ENST00000467985 RBM7Q9Y580 266 aaKnown RBP14.83□□□□□ -0.04
COL7A1-207ENST00000467985 CA2P00918 260 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 APOA1P02647 267 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 INSL3P51460 131 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 CNPY1Q3B7I2 92 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 CDNFQ49AH0 187 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 UNQ5815/PRO19632Q6UWF5 114 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 MAFIPQ8WZ33 124 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 CMTM3Q96MX0 182 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 CLCC1Q96S66 551 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 SDHAF2Q9NX18 166 aa14.82□□□□□ -0.04
COL7A1-207ENST00000467985 SLC25A17O43808 307 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 SOX15O60248 233 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 EIF4EP06730 217 aaKnown RBP14.81□□□□□ -0.04
COL7A1-207ENST00000467985 RRASP10301 218 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 LINC00205P59089 165 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 GNB1P62873 340 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 PITPNAQ00169 270 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 RTL8BQ17RB0 113 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 TMEM69Q5SWH9 247 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 HACD4Q5VWC8 232 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 ARPC1AQ92747 370 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 ADTRPQ96IZ2 230 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 OR5B12Q96R08 314 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 SLA2Q9H6Q3 261 aa14.81□□□□□ -0.04
COL7A1-207ENST00000467985 A0A0A6YYH2 397 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 A6NJ64 397 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 CTDSP2O14595 271 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 LGALS1P09382 135 aaKnown RBP14.8□□□□□ -0.04
COL7A1-207ENST00000467985 ELK1P19419 428 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 CD69Q07108 199 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 ZNF260Q3ZCT1 412 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 LAX1Q8IWV1 398 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 H1FOOQ8IZA3 346 aaPredicted RBP14.8□□□□□ -0.04
COL7A1-207ENST00000467985 LFNGQ8NES3 379 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 B9D2Q9BPU9 175 aa14.8□□□□□ -0.04
COL7A1-207ENST00000467985 TRAV18A0A075B6X5 111 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 CNIH1O95406 144 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 CTXN2P0C2S0 81 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 FXYD3Q14802 87 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 TMEM177Q53S58 311 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 ASPHD1Q5U4P2 390 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 HARBI1Q96MB7 349 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 FAM103A1Q9BTL3 118 aaKnown RBP14.79□□□□□ -0.04
COL7A1-207ENST00000467985 NXF2Q9GZY0 626 aaKnown RBP14.79□□□□□ -0.04
COL7A1-207ENST00000467985 EXTL2Q9UBQ6 330 aa14.79□□□□□ -0.04
COL7A1-207ENST00000467985 LINC01619G3V211 115 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 ARPC1BO15143 372 aaKnown RBP14.78□□□□□ -0.04
COL7A1-207ENST00000467985 ZNF429Q86V71 674 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 GRPEL2Q8TAA5 225 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 DIRAS2Q96HU8 199 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 TMEM68Q96MH6 324 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 ST6GALNAC5Q9BVH7 336 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 TPSG1Q9NRR2 321 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 PTTG2Q9NZH5 202 aa14.78□□□□□ -0.04
COL7A1-207ENST00000467985 MRPS7Q9Y2R9 242 aaKnown RBP14.78□□□□□ -0.04
COL7A1-207ENST00000467985 H3BUA1 57 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 OVOL1O14753 267 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 SHOXO15266 292 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 XRCC3O43542 346 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 SLC22A5O76082 557 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 IGLV2-23P01705 113 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 ECI1P42126 302 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 TPPP2P59282 170 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 GNG2P59768 71 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 CNIH2Q6PI25 160 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 BVESQ8NE79 360 aa14.77□□□□□ -0.05
COL7A1-207ENST00000467985 CASTOR1Q8WTX7 329 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms