RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 USF1P22415 310 aaPredicted RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 HTR1DP28221 377 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 DEFA6Q01524 100 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 IZUMO4Q1ZYL8 232 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 NHLRC3Q5JS37 347 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 OR4C13Q8NGP0 309 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 SMIM8Q96KF7 97 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 HILPDAQ9Y5L2 63 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 CORTO00230 105 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
BRAT1-203ENST00000467558 NTF3P20783 257 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 SELENOTP62341 195 aa11.68□□□□□ -0.54
BRAT1-203ENST00000467558 MYO7BQ6PIF6 2116 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 ZFHX2Q9C0A1 2572 aaPredicted RBP11.67□□□□□ -0.54
BRAT1-203ENST00000467558 APELAP0DMC3 54 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 ID4P47928 161 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TMEM37Q8WXS4 190 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 ZNF586Q9NXT0 402 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 GAR1Q9NY12 217 aaKnown RBP11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TRAPPC1Q9Y5R8 145 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PXMP4Q9Y6I8 212 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PCNX2A6NKB5 2137 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TM4SF5O14894 197 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 BCL2P10415 239 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TIMP3P35625 211 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 RNF212Q495C1 297 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 OR1L6Q8NGR2 347 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TOLLIPQ9H0E2 274 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PLSCR4Q9NRQ2 329 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 HEATR5AQ86XA9 2040 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PHF3Q92576 2039 aaKnown RBP11.67□□□□□ -0.54
BRAT1-203ENST00000467558 SERTM2A0A1B0GWG4 89 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 C17orf100A8MU93 164 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 H3BQ15 152 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 ERVH48-1M5A8F1 160 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 KBTBD11O94819 623 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 LIPFP07098 398 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 SIGLECL1Q8N7X8 197 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 TCF19Q9Y242 345 aa11.67□□□□□ -0.54
BRAT1-203ENST00000467558 PKDREJQ9NTG1 2253 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 ZG16O60844 167 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 CRYBA1P05813 215 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 CEACAM18A8MTB9 384 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 SLC25A17O43808 307 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 NAT1P18440 290 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 MPZP25189 248 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 ARF6P62330 175 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 DLK1P80370 383 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 C2orf68Q2NKX9 166 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 FAM166AQ6J272 317 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 OR13A1Q8NGR1 328 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 TP53BP1Q12888 1972 aaPredicted RBP11.66□□□□□ -0.54
BRAT1-203ENST00000467558 FAM157CP0CG43 387 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 RAB5AP20339 215 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 SRP14P37108 136 aaKnown RBP11.66□□□□□ -0.54
BRAT1-203ENST00000467558 C1QTNF12Q5T7M4 302 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 SPNS3Q6ZMD2 512 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 OR8I2Q8N0Y5 310 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 OR10G8Q8NGN5 311 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 OR2T10Q8NGZ9 312 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 ANAPC16Q96DE5 110 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 METTL1Q9UBP6 276 aaKnown RBP11.66□□□□□ -0.54
BRAT1-203ENST00000467558 GOSR1O95249 250 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 OR10J1P30954 320 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 KIR2DL2P43627 348 aaPredicted RBP11.66□□□□□ -0.54
BRAT1-203ENST00000467558 FOXF2Q12947 444 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 CBLN2Q8IUK8 224 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 SIRT7Q9NRC8 400 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 NAT8BQ9UHF3 227 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 RAXQ9Y2V3 346 aa11.66□□□□□ -0.54
BRAT1-203ENST00000467558 HELZP42694 1942 aaKnown RBP11.65□□□□□ -0.54
BRAT1-203ENST00000467558 TRBV6-7A0A0A0MS04 114 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 LDLRAD4O15165 306 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 OTX1P32242 354 aaPredicted RBP11.65□□□□□ -0.54
BRAT1-203ENST00000467558 WNT5AP41221 380 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 COMPP49747 757 aaPredicted RBP11.65□□□□□ -0.54
BRAT1-203ENST00000467558 FAM201AQ5SY85 155 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 FAM106CPP0CH98 169 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
BRAT1-203ENST00000467558 FAM216BQ8N7L0 139 aa11.65□□□□□ -0.54
BRAT1-203ENST00000467558 A0A0A6YYD4 124 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 PROB1E7EW31 1015 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 IL18BPO95998 194 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 ZNF735P0CB33 412 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 COX6B1P14854 86 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 ISOC2Q96AB3 205 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 TXNDC17Q9BRA2 123 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 CLCF1Q9UBD9 225 aa11.65□□□□□ -0.55
BRAT1-203ENST00000467558 IGHV1-18A0A0C4DH31 117 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1-12A0A0C4DH73 117 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 HELTA6NFD8 242 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 E9PLN8 166 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 E9PQ18 207 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 HSBP1O75506 76 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 IGKV1D-12P01611 117 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 ATP5IP56385 69 aaPredicted RBP11.64□□□□□ -0.55
BRAT1-203ENST00000467558 HIST1H3AP68431 136 aa11.64□□□□□ -0.55
BRAT1-203ENST00000467558 WDR82Q6UXN9 313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms