RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 OR4F4Q96R69 305 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 GPHA2Q96T91 129 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 PARP11Q9NR21 331 aa20.3■□□□□ 0.84
SMC4-206ENST00000465903 SHOXO15266 292 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 CRYZL1O95825 349 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 IGHG4P01861 327 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 HLA-DMAP28067 261 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 CRIP2P52943 208 aaPredicted RBP20.29■□□□□ 0.84
SMC4-206ENST00000465903 BRWD1-AS2P59051 145 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 MSMO1Q15800 293 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 KHDC1LQ5JSQ8 128 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 LCNL1Q6ZST4 164 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 C18orf65Q6ZTR6 163 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 MFSD4AQ8N468 514 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 RNF152Q8N8N0 203 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 OR5H2Q8NGV7 314 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 ABHD1Q96SE0 405 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 SLC5A7Q9GZV3 580 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 ZFP57Q9NU63 452 aa20.29■□□□□ 0.84
SMC4-206ENST00000465903 FCGR3BO75015 233 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 TPPPO94811 219 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 CA2P00918 260 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 ELANEP08246 267 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 TAS2R46P59540 309 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 FXYD4P59646 89 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 SSBP2P81877 361 aaPredicted RBP20.28■□□□□ 0.84
SMC4-206ENST00000465903 FOXE3Q13461 319 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 MRGPRG-AS1Q2M3A8 158 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 C19orf54Q5BKX5 351 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 ZNF562Q6V9R5 426 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 KCTD9Q7L273 389 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 LAX1Q8IWV1 398 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 HSD17B10Q99714 261 aaKnown RBP20.28■□□□□ 0.84
SMC4-206ENST00000465903 NUBP2Q9Y5Y2 271 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 NOTCH3Q9UM47 2321 aa20.28■□□□□ 0.84
SMC4-206ENST00000465903 TRAV41A0A0B4J266 112 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 NOL3O60936 208 aaKnown RBP20.27■□□□□ 0.84
SMC4-206ENST00000465903 RPLP1P05386 114 aaKnown RBP20.27■□□□□ 0.84
SMC4-206ENST00000465903 HRH1P35367 487 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 CBX3Q13185 183 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 ZNF66Q6ZN08 573 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 PPP1R27Q86WC6 154 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 SLIRPQ9GZT3 109 aaKnown RBP20.27■□□□□ 0.84
SMC4-206ENST00000465903 TAS2R8Q9NYW2 309 aa20.27■□□□□ 0.84
SMC4-206ENST00000465903 NOTCH1P46531 2555 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 ARPC1BO15143 372 aaKnown RBP20.26■□□□□ 0.83
SMC4-206ENST00000465903 RGS5O15539 181 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 PSMB8P28062 276 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 RCVRNP35243 200 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 PJVKQ0ZLH3 352 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 OR2B11Q5JQS5 317 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 MINDY2Q8NBR6 621 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 ZBTB34Q8NCN2 500 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 OR52I2Q8NH67 350 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 OSR1Q8TAX0 266 aaPredicted RBP20.26■□□□□ 0.83
SMC4-206ENST00000465903 ZNF2Q9BSG1 426 aaPredicted RBP20.26■□□□□ 0.83
SMC4-206ENST00000465903 FAM103A1Q9BTL3 118 aaKnown RBP20.26■□□□□ 0.83
SMC4-206ENST00000465903 RBM38Q9H0Z9 239 aaKnown RBP20.26■□□□□ 0.83
SMC4-206ENST00000465903 KLK11Q9UBX7 282 aa20.26■□□□□ 0.83
SMC4-206ENST00000465903 TNFSF12O43508 249 aa20.25■□□□□ 0.83
SMC4-206ENST00000465903 IGLV1-40P01703 118 aa20.25■□□□□ 0.83
SMC4-206ENST00000465903 RNASE12Q5GAN4 147 aaKnown RBP20.25■□□□□ 0.83
SMC4-206ENST00000465903 CXorf66Q5JRM2 361 aaPredicted RBP20.25■□□□□ 0.83
SMC4-206ENST00000465903 ZNF818PQ6ZRF7 136 aa20.25■□□□□ 0.83
SMC4-206ENST00000465903 MOB3AQ96BX8 217 aa20.25■□□□□ 0.83
SMC4-206ENST00000465903 PRELID3BQ9Y3B1 194 aa20.25■□□□□ 0.83
SMC4-206ENST00000465903 GNRHRP30968 328 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 UBE2KP61086 200 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 HERV-K104P61576 105 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 KIAA0141Q14154 515 aaPredicted RBP20.24■□□□□ 0.83
SMC4-206ENST00000465903 ECSCRQ19T08 205 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 TMEM17Q86X19 198 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 TEX45Q8NA69 505 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 TCTEX1D2Q8WW35 142 aa20.24■□□□□ 0.83
SMC4-206ENST00000465903 NXF2Q9GZY0 626 aaKnown RBP20.24■□□□□ 0.83
SMC4-206ENST00000465903 SOX15O60248 233 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 PF4V1P10720 104 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 FXYD3Q14802 87 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 VMA21Q3ZAQ7 101 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 OR6F1Q8NGZ6 308 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 MYOZ3Q8TDC0 251 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 FXYD6Q9H0Q3 95 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 KLK15Q9H2R5 256 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 MTFP1Q9UDX5 166 aa20.23■□□□□ 0.83
SMC4-206ENST00000465903 CDX1P47902 265 aaPredicted RBP20.22■□□□□ 0.83
SMC4-206ENST00000465903 ETV3LQ6ZN32 361 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 C8orf86Q6ZUL3 223 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 LFNGQ8NES3 379 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 ABHD5Q8WTS1 349 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 ARPC1AQ92747 370 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 DCUN1D5Q9BTE7 237 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 A3GALT2U3KPV4 340 aa20.22■□□□□ 0.83
SMC4-206ENST00000465903 DGCR2P98153 550 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 AKIRIN2Q53H80 203 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 IDO2Q6ZQW0 420 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 ZNF695Q8IW36 515 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 KLHL30-AS1Q8NEE0 82 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 WFDC9Q8NEX5 89 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 C15orf40Q8WUR7 153 aa20.21■□□□□ 0.83
SMC4-206ENST00000465903 DIRAS2Q96HU8 199 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms