RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 SMIM18P0DKX4 95 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CT45A6P0DMU7 189 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CT45A5P0DMU8 189 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CT45A7P0DMV0 189 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CD36P16671 472 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 TMEM11P17152 192 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 BRS3P32247 399 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 VDAC2P45880 294 aaPredicted RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 RAB7AP51149 207 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 LSM3P62310 102 aaKnown RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 HLA-DRB3P79483 266 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 HTD2P86397 168 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 HES1Q14469 280 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 NSUN5P1Q3KNT7 163 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 C9orf152Q5JTZ5 239 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 FAM90A2PQ658T7 463 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 SFXN4Q6P4A7 337 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 SLC16A12Q6ZSM3 486 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF833PQ6ZTB9 187 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF329Q86UD4 541 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 OR8H3Q8N146 312 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 FAM71E2Q8N5Q1 922 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 Q8N9W7 124 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 TSPAN14Q8NG11 270 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 OR5AU1Q8NGC0 362 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 LGALS14Q8TCE9 139 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CREB3L1Q96BA8 519 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 YPEL2Q96QA6 119 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 NABP2Q9BQ15 211 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 ABHD14AQ9BUJ0 271 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 NAA50Q9GZZ1 169 aaKnown RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 CHMP1AQ9HD42 196 aaPredicted RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 RAB18Q9NP72 206 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 DAPK2Q9UIK4 370 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 RAB22AQ9UL26 194 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 RNF150Q9ULK6 438 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 MOB4Q9Y3A3 225 aa3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 AMMECR1Q9Y4X0 333 aaPredicted RBP3.76□□□□□ -1.81
EXOSC3-204ENST00000465860 TMEM235A6NFC5 223 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 G3V4G9 280 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 FCN1O00602 326 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 PDCD5O14737 125 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 BET1O15155 118 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 LANCL1O43813 399 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 IGHG2P01859 326 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 PRB2P02812 416 aaPredicted RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 FCER2P06734 321 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 FAM106CPP0CH98 169 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 HIST1H1DP16402 221 aaKnown RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 GALP22466 123 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 MYL9P24844 172 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 CD1BP29016 333 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 CEACAM6P40199 344 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 MNDAP41218 407 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 RANBP1P43487 201 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 NCS1P62166 190 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 NDPQ00604 133 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 TIMM50Q3ZCQ8 353 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 Q3ZCU0 254 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 CDNFQ49AH0 187 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 IDNKQ5T6J7 187 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 CCDC144NLQ6NUI1 221 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 TRAT1Q6PIZ9 186 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 C16orf82Q7Z2V1 217 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF554Q86TJ5 538 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 TGIF2LXQ8IUE1 241 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF383Q8NA42 475 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 DRAXINQ8NBI3 349 aaPredicted RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 OR56B1Q8NGI3 324 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 ABHD5Q8WTS1 349 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 NUDCD2Q8WVJ2 157 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 GALMQ96C23 342 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 RAB3CQ96E17 227 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 KCTD7Q96MP8 289 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 S1PR3Q99500 378 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 CMSS1Q9BQ75 279 aaKnown RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 URM1Q9BTM9 101 aaKnown RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 ATG5Q9H1Y0 275 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 C12orf4Q9NQ89 552 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 KCNIP1Q9NZI2 227 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 ZNF107Q9UII5 783 aaPredicted RBP3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 JPT1Q9UK76 154 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 SSR3Q9UNL2 185 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 GAB2Q9UQC2 676 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 FBXO7Q9Y3I1 522 aa3.75□□□□□ -1.81
EXOSC3-204ENST00000465860 TRBV6-7A0A0A0MS04 114 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 IGKV1D-13A0A0B4J2D9 117 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 MEIS3P1A6NDR6 274 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 NCBP2LA6PVI3 153 aaKnown RBP3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 SERPINE3A8MV23 424 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 TRDCB7Z8K6 153 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 H0YJW9 148 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 J3QRK9 145 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 M0QZ24 198 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 FABP7O15540 132 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 NOL3O60936 208 aaKnown RBP3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 MOSP00540 346 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 IGKV1-16P04430 117 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 CSF1P09603 554 aa3.74□□□□□ -1.81
EXOSC3-204ENST00000465860 IGKV1-13P0DP09 117 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms