RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 PDZD9Q8IXQ8 264 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 FAM71E2Q8N5Q1 922 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 ZBTB34Q8NCN2 500 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 OR52M1Q8NGK5 317 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 FAM216AQ8WUB2 273 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 TBX15Q96SF7 602 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 UNKLQ9H9P5 680 aaKnown RBP13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 SIRT7Q9NRC8 400 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 SESN1Q9Y6P5 492 aa13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 SONP18583 2426 aaKnown RBP13.81□□□□□ -0.2
EXOSC3-203ENST00000465229 ST8SIA3O43173 380 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 TOX4O94842 621 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 CEACAM6P40199 344 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 GNMTQ14749 295 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 NMSQ5H8A3 153 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 VMO1Q7Z5L0 202 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 LRRC20Q8TCA0 184 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 TNFRSF14Q92956 283 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 PCGF1Q9BSM1 259 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 C7orf69Q9H7B7 122 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 GFOD1Q9NXC2 390 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 POMT1Q9Y6A1 747 aa13.8□□□□□ -0.2
EXOSC3-203ENST00000465229 IGLV2-14P01704 120 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 IGHV3-7P01780 117 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 SLC25A6P12236 298 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 RPL12P30050 165 aaKnown RBP13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 TMEM30BQ3MIR4 351 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 GPR157Q5UAW9 335 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 BAP18Q8IXM2 172 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 GNG12Q9UBI6 72 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 JPT1Q9UK76 154 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 LSM5Q9Y4Y9 91 aaKnown RBP13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 A0A087X0M5 115 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 A0A1B0GX30 115 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 RNF212BA8MTL3 300 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 J3QLI3 93 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 KCNAB3O43448 404 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 AVPP01185 164 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 PPP1CCP36873 323 aaKnown RBP13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 P2RY1P47900 373 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 MORN2Q502X0 79 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 LEAP2Q969E1 77 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 TMEM133Q9H2Q1 129 aa13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 LIN7CQ9NUP9 197 aaKnown RBP13.79□□□□□ -0.2
EXOSC3-203ENST00000465229 F8P00451 2351 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 YPEL1O60688 119 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 GAPDHP04406 335 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 CD99P14209 185 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 HCP5Q6MZN7 132 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 C1orf229Q6ZS94 237 aaPredicted RBP13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 FOXRED2Q8IWF2 684 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 YPEL2Q96QA6 119 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 PARP12Q9H0J9 701 aaKnown RBP13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 PSG11Q9UQ72 335 aa13.78□□□□□ -0.2
EXOSC3-203ENST00000465229 CD5LO43866 347 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 SCGB1D2O95969 90 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 SERPINE2P07093 398 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF134P52741 427 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 THOC7Q6I9Y2 204 aaKnown RBP13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 ABHD12Q8N2K0 398 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF645Q8N7E2 425 aa13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 RBM7Q9Y580 266 aaKnown RBP13.77□□□□□ -0.21
EXOSC3-203ENST00000465229 IGHV2-26A0A0B4J1V2 119 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 RNASEK-C17orf49H0YIS7 233 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 GPR137BO60478 399 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 OR8U9P0C7N5 309 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 FOSL1P15407 271 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 HOXB4P17483 251 aaPredicted RBP13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 COX7A1P24310 79 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 NKX2-1P43699 371 aaPredicted RBP13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 KLRD1Q13241 179 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 AANATQ16613 207 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 PNKDQ8N490 385 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 EIF4E3Q8N5X7 224 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 DRAM1Q8N682 238 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 ZNF439Q8NDP4 499 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 OR13D1Q8NGV5 346 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 OR8U1Q8NH10 309 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 LSM10Q969L4 123 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 SMR3AQ99954 134 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 C11orf1Q9H5F2 150 aa13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 FAM212BQ9NTI7 297 aaPredicted RBP13.76□□□□□ -0.21
EXOSC3-203ENST00000465229 A0A1B0GU03 582 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 MFSD2BA6NFX1 497 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 TNFSF12O43508 249 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 JTBO76095 146 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 ID3Q02535 119 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 Q3ZCU0 254 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 CT45A1Q5HYN5 189 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 EIF5AL1Q6IS14 154 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 CT45A3Q8NHU0 189 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 LHX4Q969G2 390 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 GPHA2Q96T91 129 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 ZC4H2Q9NQZ6 224 aa13.75□□□□□ -0.21
EXOSC3-203ENST00000465229 SDHAF2Q9NX18 166 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms