RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 TAS2R30P59541 319 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 GNA12Q03113 381 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 CST9Q5W186 159 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 AGTRAPQ6RW13 159 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 DAND5Q8N907 189 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 CLDND2Q8NHS1 167 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 C12orf43Q96C57 262 aaKnown RBP1.63□□□□□ -2.15
CLK1-208ENST00000464454 SLC35G5Q96KT7 338 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 OR52B2Q96RD2 323 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 UCK1Q9HA47 277 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 NDUFB11Q9NX14 153 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 USE1Q9NZ43 259 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 POLR1DQ9Y2S0 133 aa1.63□□□□□ -2.15
CLK1-208ENST00000464454 KLK5Q9Y337 293 aaPredicted RBP1.63□□□□□ -2.15
CLK1-208ENST00000464454 NYNRINQ9P2P1 1898 aaKnown RBP1.63□□□□□ -2.15
CLK1-208ENST00000464454 ITGB4P16144 1822 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 NPYP01303 97 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 HLA-DRAP01903 254 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 TYMSP04818 313 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 HLA-DQB2P05538 268 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 ZNF728P0DKX0 622 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 CD24P25063 80 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 RPL27AP46776 148 aaKnown RBP1.62□□□□□ -2.15
CLK1-208ENST00000464454 KRTAP12-1P59990 96 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 MLLT11Q13015 90 aaPredicted RBP1.62□□□□□ -2.15
CLK1-208ENST00000464454 HES1Q14469 280 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 JOSD1Q15040 202 aaPredicted RBP1.62□□□□□ -2.15
CLK1-208ENST00000464454 UAP1Q16222 522 aaPredicted RBP1.62□□□□□ -2.15
CLK1-208ENST00000464454 PLPPR5Q32ZL2 321 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 SLC51BQ86UW2 128 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 TMEM156Q8N614 296 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 UBL4BQ8N7F7 174 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 ZNF565Q8N9K5 539 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 JOSD2Q8TAC2 188 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 TMEM222Q9H0R3 208 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 FAM215AQ9Y5M1 114 aa1.62□□□□□ -2.15
CLK1-208ENST00000464454 ABCC11Q96J66 1382 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 MAP3K5Q99683 1374 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 REREQ9P2R6 1566 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 M0QZ92 97 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 AHSA1O95433 338 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 UCHL1P09936 223 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 MAGEA2P43356 314 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 GABRA2P47869 451 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 BLVRAP53004 296 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 CTBP2P56545 445 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 RBM11P57052 281 aaKnown RBP1.61□□□□□ -2.15
CLK1-208ENST00000464454 TBPL1P62380 186 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 ZNF90Q03938 601 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 PPP1R1AQ13522 171 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 RGS21Q2M5E4 152 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 LGALS9BQ3B8N2 356 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 OGFRL1Q5TC84 451 aaPredicted RBP1.61□□□□□ -2.15
CLK1-208ENST00000464454 SPATA12Q7Z6I5 190 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 LHFPL1Q86WI0 220 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 HAVCR2Q8TDQ0 301 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 DCANP1Q8TF63 244 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 NMNAT3Q96T66 252 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 PAIP2Q9BPZ3 127 aaKnown RBP1.61□□□□□ -2.15
CLK1-208ENST00000464454 MAP1LC3AQ9H492 121 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 FGFR1OP2Q9NVK5 253 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 BABAM2Q9NXR7 383 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 DKKL1Q9UK85 242 aa1.61□□□□□ -2.15
CLK1-208ENST00000464454 POLR3HQ9Y535 204 aaPredicted RBP1.61□□□□□ -2.15
CLK1-208ENST00000464454 TMED7-TICAM2A0A0A6YYA0 188 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 TRGV5A0A0B4J1U4 118 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 A0A0G2JQZ4 141 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 MDFIC2A0A1B0GVS7 189 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 A0A1W2PQD3 144 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 SLC16A4O15374 487 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 IL3P08700 152 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 FKBP1AP62942 108 aaKnown RBP1.6□□□□□ -2.15
CLK1-208ENST00000464454 PABPC1L2AQ5JQF8 200 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 Q6ZS52 159 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 TMEM161BQ8NDZ6 487 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 OR4X2Q8NGF9 303 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 LHFPL5Q8TAF8 219 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 PIGXQ8TBF5 258 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 SMCR5Q8TEV8 140 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 DDI1Q8WTU0 396 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 RNASE6Q93091 150 aaKnown RBP1.6□□□□□ -2.15
CLK1-208ENST00000464454 SFRP2Q96HF1 295 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 COL11A1P12107 1806 aaPredicted RBP1.6□□□□□ -2.15
CLK1-208ENST00000464454 GRIN2BQ13224 1484 aa1.6□□□□□ -2.15
CLK1-208ENST00000464454 ADCY9O60503 1353 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 SCN9AQ15858 1988 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 RTEL1-TNFRSF6BF6WH68 1400 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 GBF1Q92538 1859 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 IGLV3-9A0A075B6K5 115 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 A0A087WUU8 490 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 ARRDC5A6NEK1 342 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 LRRN3E7EW58 273 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 CXCR6O00574 342 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 BHLHE40O14503 412 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 TXNDC9O14530 226 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 DEXIO95424 95 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 APOMO95445 188 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 MYL12AP19105 171 aa1.59□□□□□ -2.15
CLK1-208ENST00000464454 FAM78BQ5VT40 261 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 129.1 ms