RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ASB13Q8WXK3 278 aa1.24□□□□□ -2.21
PTPN12-210ENST00000464313 ZNF514Q96K75 400 aaPredicted RBP1.24□□□□□ -2.21
PTPN12-210ENST00000464313 NMNAT3Q96T66 252 aa1.24□□□□□ -2.21
PTPN12-210ENST00000464313 MRPL32Q9BYC8 188 aaKnown RBP1.24□□□□□ -2.21
PTPN12-210ENST00000464313 DERL2Q9GZP9 239 aa1.24□□□□□ -2.21
PTPN12-210ENST00000464313 HHLA3Q9XRX5 114 aa1.24□□□□□ -2.21
PTPN12-210ENST00000464313 KDM5BQ9UGL1 1544 aa1.24□□□□□ -2.21
PTPN12-210ENST00000464313 FN1P02751 2386 aaKnown RBP1.23□□□□□ -2.21
PTPN12-210ENST00000464313 A0A1W2PP64 1363 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 TRGV2A0A075B6R0 118 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 A0A087WUU8 490 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 IGKV2-29A2NJV5 120 aaPredicted RBP1.23□□□□□ -2.21
PTPN12-210ENST00000464313 OR6C6A6NF89 314 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 NDUFB2O95178 105 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 MT-CO2P00403 227 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 IL6P05231 212 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 HLA-DQB2P05538 268 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 CTBP2P56545 445 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 BTN3A2P78410 334 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 HLA-DRB3P79483 266 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 OR13C8Q8NGS7 320 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 C12orf43Q96C57 262 aaKnown RBP1.23□□□□□ -2.21
PTPN12-210ENST00000464313 MS4A6EQ96DS6 147 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 PACRGQ96M98 296 aaPredicted RBP1.23□□□□□ -2.21
PTPN12-210ENST00000464313 THSD7AQ9UPZ6 1657 aa1.23□□□□□ -2.21
PTPN12-210ENST00000464313 TEX50A0A1B0GTY4 177 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 C5orf49A4QMS7 147 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 COCHO43405 550 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 HPGDSO60760 199 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 PGLYRP1O75594 196 aaPredicted RBP1.22□□□□□ -2.21
PTPN12-210ENST00000464313 IFNGR2P38484 337 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 RPL27AP46776 148 aaKnown RBP1.22□□□□□ -2.21
PTPN12-210ENST00000464313 IDH3GP51553 393 aaPredicted RBP1.22□□□□□ -2.21
PTPN12-210ENST00000464313 EMP2P54851 167 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 TBPL1P62380 186 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 FAM19A5Q7Z5A7 132 aaPredicted RBP1.22□□□□□ -2.21
PTPN12-210ENST00000464313 NAA40Q86UY6 237 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 GPHB5Q86YW7 130 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 VCX3BQ9H321 246 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 KLK5Q9Y337 293 aaPredicted RBP1.22□□□□□ -2.21
PTPN12-210ENST00000464313 GMEB1Q9Y692 573 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 KIAA2026Q5HYC2 2103 aa1.22□□□□□ -2.21
PTPN12-210ENST00000464313 RAD50Q92878 1312 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 WDR90Q96KV7 1748 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 C9JCJ5 164 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 F5H768 121 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 BIRC5O15392 142 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 NPYP01303 97 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 UCHL1P09936 223 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 HIST1H1CP16403 213 aaKnown RBP1.21□□□□□ -2.22
PTPN12-210ENST00000464313 CD79BP40259 229 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 RPS24P62847 133 aaKnown RBP1.21□□□□□ -2.22
PTPN12-210ENST00000464313 OR10K2Q6IF99 312 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 RASSF6Q6ZTQ3 369 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 DEFB119Q8N690 84 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 OR8B12Q8NGG6 310 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 RAB2BQ8WUD1 216 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 SMIM19Q96E16 107 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 TMEM222Q9H0R3 208 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 IMP3Q9NV31 184 aaKnown RBP1.21□□□□□ -2.22
PTPN12-210ENST00000464313 BABAM2Q9NXR7 383 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 DOK5Q9P104 306 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 CFAP45Q9UL16 551 aa1.21□□□□□ -2.22
PTPN12-210ENST00000464313 RBM7Q9Y580 266 aaKnown RBP1.21□□□□□ -2.22
PTPN12-210ENST00000464313 RP1L1Q8IWN7 2480 aaPredicted RBP1.21□□□□□ -2.22
PTPN12-210ENST00000464313 MED13Q9UHV7 2174 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 GRIN2BQ13224 1484 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 IGHV3-64A0A075B6Q5 118 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 ZNF737O75373 536 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 C1QCP02747 245 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 OCMP0CE72 109 aaPredicted RBP1.2□□□□□ -2.22
PTPN12-210ENST00000464313 DEFA4P12838 97 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 MAGEA12P43365 314 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 CXCR4P61073 352 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 TMEM258P61165 79 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 GLO1Q04760 184 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 TMEM155Q4W5P6 130 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 OR1L8Q8NGR8 309 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 ZNF675Q8TD23 568 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 EEF1AKMT1Q8WVE0 214 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 SDK1Q7Z5N4 2213 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 CCDC88CQ9P219 2028 aa1.2□□□□□ -2.22
PTPN12-210ENST00000464313 NAPSAO96009 420 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 REG1AP05451 166 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 ZNF705DP0CH99 300 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-210ENST00000464313 ZNF705BP0CI00 300 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-210ENST00000464313 FXYD7P58549 80 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 HOXC5Q00444 222 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 RELAQ04206 551 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 PPP1R1AQ13522 171 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 EBPQ15125 230 aaKnown RBP1.19□□□□□ -2.22
PTPN12-210ENST00000464313 PLEKHG7Q6ZR37 379 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 C10orf126Q8N4M7 172 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 ASB17Q8WXJ9 295 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 ANKRD36BP1Q96IX9 119 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 KCTD7Q96MP8 289 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 IMMP2LQ96T52 175 aa1.19□□□□□ -2.22
PTPN12-210ENST00000464313 SPANXB1Q9NS25 103 aaPredicted RBP1.19□□□□□ -2.22
PTPN12-210ENST00000464313 ZNHIT6Q9NWK9 470 aaKnown RBP1.19□□□□□ -2.22
PTPN12-210ENST00000464313 NUMA1Q14980 2115 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms