RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 GTF3C1Q12789 2109 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 C12orf74Q32Q52 190 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 SMIM21Q3B7S5 101 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 KLHL12Q53G59 568 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 AKR1C8PQ5T2L2 129 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 C9orf64Q5T6V5 341 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 GUSBP11Q6P575 273 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 ADAMTS13Q76LX8 1427 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 CAMK2N1Q7Z7J9 78 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 C1orf174Q8IYL3 243 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 KRTCAP2Q8N6L1 136 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 SLC25A29Q8N8R3 303 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 ZDHHC22Q8N966 263 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 OR9A2Q8NGT5 310 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 RNASE11Q8TAA1 199 aaKnown RBP2.55□□□□□ -2
ITGB1-208ENST00000464001 CD200R1Q8TD46 325 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 GNPDA2Q8TDQ7 276 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 CT55Q8WUE5 264 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 REEP6Q96HR9 211 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 ARAP1Q96P48 1450 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 TSPAN32Q96QS1 320 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 EFCAB11Q9BUY7 163 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.55□□□□□ -2
ITGB1-208ENST00000464001 CCDC90BQ9GZT6 254 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 SH3BGRL3Q9H299 93 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 PRTFDC1Q9NRG1 225 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 C8orf17Q9NRJ1 99 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 CYTL1Q9NRR1 136 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 LYRM2Q9NU23 88 aaPredicted RBP2.55□□□□□ -2
ITGB1-208ENST00000464001 DHCR7Q9UBM7 475 aaKnown RBP2.55□□□□□ -2
ITGB1-208ENST00000464001 JPT1Q9UK76 154 aa2.55□□□□□ -2
ITGB1-208ENST00000464001 DSCAMO60469 2012 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 MYH11P35749 1972 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 MYH7P12883 1935 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DENND4CQ5VZ89 1909 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 BRWD3Q6RI45 1802 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 LTBP1Q14766 1721 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DCCP43146 1447 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 RTL1A6NKG5 1358 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 IGHV1OR15-9A0A0B4J2B8 117 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 IGHV3-66A0A0C4DH42 116 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 A0A1B0GV90 55 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 RFPL4AA6NLU0 287 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 LINC00587B1AMM8 73 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 RFPL4AL1F8VTS6 287 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.54□□□□□ -2
ITGB1-208ENST00000464001 OR7C2O60412 319 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DEDDO75618 318 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CDRT1O95170 752 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CRYZL1O95825 349 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CCNE2O96020 404 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 INSP01308 110 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 OPN1SWP03999 348 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CSN2P05814 226 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 TLX1NBP0CAT3 122 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 SPI1P17947 270 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CDK2P24941 298 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 ERP29P30040 261 aaKnown RBP2.54□□□□□ -2
ITGB1-208ENST00000464001 AKR1C3P42330 323 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DAPP51397 102 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CCR6P51684 374 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CMC4P56277 68 aaPredicted RBP2.54□□□□□ -2
ITGB1-208ENST00000464001 CDC42P60953 191 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 BAMBIQ13145 260 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 C5orf46Q6UWT4 87 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 TOMM20LQ6UXN7 152 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 GALMQ96C23 342 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 ROPN1LQ96C74 230 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CNBD2Q96M20 576 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 FOPNLQ96NB1 174 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 ERMAPQ96PL5 475 aaPredicted RBP2.54□□□□□ -2
ITGB1-208ENST00000464001 CAMK2N2Q96S95 79 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 FAM96AQ9H5X1 160 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 ACER3Q9NUN7 267 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 RASL12Q9NYN1 266 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 ZNF492Q9P255 531 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 TAC3Q9UHF0 121 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DNAJC12Q9UKB3 198 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 FIS1Q9Y3D6 152 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 NUBP2Q9Y5Y2 271 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 DOCK4Q8N1I0 1966 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 CCDC88AQ3V6T2 1871 aa2.54□□□□□ -2
ITGB1-208ENST00000464001 IGLV1-50A0A075B6I6 118 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 hCG_1818297A0A087WSY0 165 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 IGHV5-51A0A0C4DH38 117 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 A0A1B0GVX0 72 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 A8MT66 165 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 H0YJW9 148 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 H3BSA7 217 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 SOCS1O15524 211 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 EIF1BO60739 113 aaKnown RBP2.53□□□□□ -2
ITGB1-208ENST00000464001 CCNKO75909 580 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 PIAS1O75925 651 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 APOMO95445 188 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 ZNF682O95780 498 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 LTAP01374 205 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 IGHV3-11P01762 117 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 HLA-DQB2P05538 268 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 OR10J1P30954 320 aa2.53□□□□□ -2
ITGB1-208ENST00000464001 GABRA3P34903 492 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms