RNA–Protein interactions for RNA: ENST00000463011.5

GPNMB-205, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 378 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-205ENST00000463011 PRR9Q5T870 116 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 AMTNQ6UX39 209 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 ZNF561Q8N587 486 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 PHOSPHO2Q8TCD6 241 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 RPS4Y2Q8TD47 263 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 SFRP2Q96HF1 295 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 IGF2BP2-AS1Q96M15 143 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 OR52E6Q96RD3 313 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 NMNAT3Q96T66 252 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 NKX6-2Q9C056 277 aaPredicted RBP2.12□□□□□ -2.07
GPNMB-205ENST00000463011 FBXO5Q9UKT4 447 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 PRELID3BQ9Y3B1 194 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 ADAMTSL1Q8N6G6 1762 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 PTPRJQ12913 1337 aa2.12□□□□□ -2.07
GPNMB-205ENST00000463011 PRRC2AP48634 2157 aaKnown RBP2.12□□□□□ -2.07
GPNMB-205ENST00000463011 ARID1AO14497 2285 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 WRNQ14191 1432 aaPredicted RBP eCLIP2.11□□□□□ -2.07
GPNMB-205ENST00000463011 TRIP11Q15643 1979 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 A0A087WUJ7 227 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 PQLC2LA1A4F0 135 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 C19orf71A6NCJ1 209 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 LST1O00453 97 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SLC17A3O00476 420 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 BHLHE40O14503 412 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SYNGR2O43760 224 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 LY6HO94772 140 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 CPSF4O95639 269 aaKnown RBP2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SOD1P00441 154 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 PRB2P02812 416 aaPredicted RBP2.11□□□□□ -2.07
GPNMB-205ENST00000463011 HRES1P13985 223 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 AZU1P20160 251 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 NPPCP23582 126 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SERPINB10P48595 397 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 GZMMP51124 257 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 PSME3P61289 254 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 TBPL1P62380 186 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 TNFAIP6P98066 277 aaPredicted RBP2.11□□□□□ -2.07
GPNMB-205ENST00000463011 RUNX1Q01196 453 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 CST6Q15828 149 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 TMEM97Q5BJF2 176 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 GPHB5Q86YW7 130 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SLC35F6Q8N357 371 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 SLC22A24Q8N4F4 322 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 FNDC9Q8TBE3 224 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 CEP19Q96LK0 163 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 CNBD2Q96M20 576 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 OR8B2Q96RD0 313 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 C9orf16Q9BUW7 83 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 DCSTAMPQ9H295 470 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 C16orf95Q9H693 158 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 GPR84Q9NQS5 396 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 VPREB3Q9UKI3 123 aa2.11□□□□□ -2.07
GPNMB-205ENST00000463011 COL18A1P39060 1754 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 SPATA31E1Q6ZUB1 1445 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 ADGRL1O94910 1474 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 LOC102725191A0A1B0GVB3 256 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 VPS37CA5D8V6 355 aaPredicted RBP2.1□□□□□ -2.07
GPNMB-205ENST00000463011 HAND1O96004 215 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 CCL3P10147 92 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 CRHBPP24387 322 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 ZNF140P52738 457 aaPredicted RBP2.1□□□□□ -2.07
GPNMB-205ENST00000463011 HTR4Q13639 388 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 CDK10Q15131 360 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 GUK1Q16774 197 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 DEFB134Q4QY38 66 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 PYDC2Q56P42 97 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 HACD4Q5VWC8 232 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 LPCAT3Q6P1A2 487 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 WDR59Q6PJI9 974 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 OR10P1Q8NGE3 313 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 SGMS2Q8NHU3 365 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 MUC7Q8TAX7 377 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 SIGMAR1Q99720 223 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 MND1Q9BWT6 205 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 ULBP3Q9BZM4 244 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 TRIM4Q9C037 500 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 SMDT1Q9H4I9 107 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 DOK5Q9P104 306 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 PRO0461Q9UI25 63 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 STOML2Q9UJZ1 356 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 ANGPT4Q9Y264 503 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 MMACHCQ9Y4U1 282 aa2.1□□□□□ -2.07
GPNMB-205ENST00000463011 PCF11O94913 1555 aaKnown RBP2.1□□□□□ -2.07
GPNMB-205ENST00000463011 DCCP43146 1447 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 YLPM1P49750 1951 aaKnown RBP2.09□□□□□ -2.07
GPNMB-205ENST00000463011 FAM236DA0A1B0GTK5 79 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 DHRS12A0PJE2 317 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 KNCNA6PVL3 124 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 A8MUN3 132 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 C17orf98A8MV24 154 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 VGLL3A8MV65 326 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 OR11H12B2RN74 326 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 C9JCJ5 164 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 RTL8CO15255 209 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 FAM236CP0DP71 79 aa2.09□□□□□ -2.07
GPNMB-205ENST00000463011 HIST1H1TP22492 207 aaPredicted RBP2.09□□□□□ -2.07
GPNMB-205ENST00000463011 RPL5P46777 297 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms