RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MARCH11A6NNE9 402 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 MEOX1P50221 254 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 RIPPLY2Q5TAB7 128 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 OR4D5Q8NGN0 318 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 RAB37Q96AX2 223 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 HARBI1Q96MB7 349 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 NUDT3O95989 172 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 OTX1P32242 354 aaPredicted RBP13.52□□□□□ -0.24
SMC4-204ENST00000462787 FBLN7Q53RD9 439 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 FAM166AQ6J272 317 aa13.52□□□□□ -0.24
SMC4-204ENST00000462787 TMEM238LA0A1B0GVL6 79 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 A6NJY4 79 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 LYZL6O75951 148 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 NPBWR2P48146 333 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 ZNF324BQ6AW86 544 aaPredicted RBP13.52□□□□□ -0.25
SMC4-204ENST00000462787 OR4C46A6NHA9 309 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 C3orf80F5H4A9 247 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 CEBPDP49716 269 aaPredicted RBP13.52□□□□□ -0.25
SMC4-204ENST00000462787 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.25
SMC4-204ENST00000462787 C1orf53Q5VUE5 145 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 DRAM1Q8N682 238 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 TMEM54Q969K7 222 aa13.52□□□□□ -0.25
SMC4-204ENST00000462787 B4E171 279 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 HYPMO75409 117 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 ID3Q02535 119 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 SLC25A40Q8TBP6 338 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 DPF1Q92782 380 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 FGF11Q92914 225 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 SMOC1Q9H4F8 434 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 WDR54Q9H977 334 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 AMMECR1Q9Y4X0 333 aaPredicted RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 IGKV1D-43A0A0B4J1Z2 117 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 GCSHP23434 173 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 TNXAQ16473 311 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 SNRNP40Q96DI7 357 aaKnown RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 GRAMD2BQ96HH9 432 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 PLA2G3Q9NZ20 509 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 THSD7AQ9UPZ6 1657 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 KLF7O75840 302 aaPredicted RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 ADMP35318 185 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 C10orf91Q5T1B1 145 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 TMEM136Q6ZRR5 245 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 ERASQ7Z444 233 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 CHODLQ9H9P2 273 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 SLC17A3O00476 420 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 OR4A8P0C604 315 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
SMC4-204ENST00000462787 THYN1Q9P016 225 aa13.51□□□□□ -0.25
SMC4-204ENST00000462787 C2CD4DB7Z1M9 353 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 SFTPCP11686 197 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 MST1LQ2TV78 715 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 ZNF501Q96CX3 271 aaPredicted RBP13.5□□□□□ -0.25
SMC4-204ENST00000462787 CEACAM18A8MTB9 384 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 RPL7P18124 248 aaKnown RBP13.5□□□□□ -0.25
SMC4-204ENST00000462787 SOX8P57073 446 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 ARF6P62330 175 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 HBBP68871 147 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 PRNTQ86SH4 94 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 RPEQ96AT9 228 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 RASL11BQ9BPW5 248 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 KLF2Q9Y5W3 355 aaPredicted RBP13.5□□□□□ -0.25
SMC4-204ENST00000462787 LOC389332A0A1B0GUA5 103 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 A1L4Q6 167 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 COX5BP10606 129 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 TCTAP57738 103 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 PGLYRP4Q96LB8 373 aa13.5□□□□□ -0.25
SMC4-204ENST00000462787 CEACAM1P13688 526 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 CCL1P22362 96 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 PRRX1P54821 245 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 STPG3Q8N7X2 389 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 TMEM74BQ9NUR3 256 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 HIGD1AQ9Y241 93 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 A6NNC1 897 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 MKRN2OSH3BPM6 223 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 MGST3O14880 152 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 ATP5G3P48201 142 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
SMC4-204ENST00000462787 ASCL3Q9NQ33 180 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 TMEM140Q9NV12 185 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 PGPA6NDG6 321 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 ZNF576Q9H609 170 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 TMEM177Q53S58 311 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 INO80CQ6PI98 192 aaPredicted RBP13.49□□□□□ -0.25
SMC4-204ENST00000462787 NABP2Q9BQ15 211 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 UFC1Q9Y3C8 167 aa13.49□□□□□ -0.25
SMC4-204ENST00000462787 A0A0A6YYD4 124 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 DLL1O00548 723 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 ORM1P02763 201 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 PRDX2P32119 198 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 WFDC8Q8IUA0 241 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 ZNF664Q8N3J9 261 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 WNT5BQ9H1J7 359 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 ZNF430Q9H8G1 570 aaPredicted RBP13.48□□□□□ -0.25
SMC4-204ENST00000462787 TCF19Q9Y242 345 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 IGHV4-34P06331 123 aa13.48□□□□□ -0.25
SMC4-204ENST00000462787 SMIM13P0DJ93 91 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms