RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 C1orf147Q96MC9 270 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 CCL13Q99616 98 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 RSRP1Q9BUV0 290 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SCRT1Q9BWW7 348 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 NAA60Q9H7X0 242 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 HES4Q9HCC6 221 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 IL36GQ9NZH8 169 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 KIAA1456Q9P272 454 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 SLC25A10Q9UBX3 287 aaPredicted RBP6.45□□□□□ -1.38
USP4-207ENST00000462673 OR14J1Q9UGF5 321 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 FBXO7Q9Y3I1 522 aa6.45□□□□□ -1.38
USP4-207ENST00000462673 IGKV1-27A0A075B6S5 117 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 IGHV3OR15-7A0A075B7D8 119 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A10PA6NDY2 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A18PA6NE21 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A16PA6NEW6 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A20PA6NIJ5 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A8PA6NJQ4 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A7PA6NKC0 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A22PA8MWA6 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A12PA8MX19 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A5PA8MXJ8 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A23PA8MXZ1 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 B4DEV8 164 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 WNT9BO14905 357 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 SPRY1O43609 319 aaPredicted RBP6.44□□□□□ -1.38
USP4-207ENST00000462673 ARG1P05089 322 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A15PP0C7V4 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A13PP0C7W8 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A14PP0C7W9 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM90A24PP0C7X0 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 HIST1H1BP16401 226 aaKnown RBP6.44□□□□□ -1.38
USP4-207ENST00000462673 BCL3P20749 454 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 NDUFA6P56556 154 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 TAS2R60P59551 318 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 UBE2KP61086 200 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 SRPXP78539 464 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 LCN2P80188 198 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 MEF2CQ06413 473 aaPredicted RBP6.44□□□□□ -1.38
USP4-207ENST00000462673 SSX2Q16385 188 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 MPV17LQ2QL34 196 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 ABCA11PQ4W5N1 156 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 PYY3Q5JQD4 70 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 PLAC9Q5JTB6 97 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 FAM201AQ5SY85 155 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 C1orf122Q6ZSJ8 110 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 LILRB2Q8N423 598 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 OR51T1Q8NGJ9 327 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 OR5D18Q8NGL1 313 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 SPIN2AQ99865 258 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 SPIN2BQ9BPZ2 258 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 TM2D1Q9BX74 207 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 PECRQ9BY49 303 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 C7orf69Q9H7B7 122 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 RAB9BQ9NP90 201 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 DCAF16Q9NXF7 216 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 PLA2G2EQ9NZK7 142 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 AK3Q9UIJ7 227 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 ST3GAL6Q9Y274 331 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 POLQO75417 2590 aa6.44□□□□□ -1.38
USP4-207ENST00000462673 hADV38S2A0JD32 116 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 FOXI3A8MTJ6 420 aaPredicted RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 SDCBPO00560 298 aaPredicted RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 MGST3O14880 152 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 PHF1O43189 567 aaPredicted RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 HSPA12AO43301 675 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 ANGPTL7O43827 346 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 YIF1AO95070 293 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 HAND1O96004 215 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 TK1P04183 234 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 HSPB1P04792 205 aaKnown RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 EGR1P18146 543 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 SERPINA2P20848 420 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 FGF7P21781 194 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 GABRR1P24046 479 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 DDTP30046 118 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 PPP1CCP36873 323 aaKnown RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 SRP14P37108 136 aaKnown RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 NPBWR2P48146 333 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 COL10A1Q03692 680 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 PDCD1Q15116 288 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 ZNF506Q5JVG8 444 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 LYPD2Q6UXB3 125 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 DPPA3Q6W0C5 159 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 ZNF841Q6ZN19 808 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 SLC35E3Q7Z769 313 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 RTN4RL2Q86UN3 420 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 LGI3Q8N145 548 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 HIST3H2BBQ8N257 126 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 FAM89BQ8N5H3 189 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 LRTM2Q8N967 370 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 ZNRF1Q8ND25 227 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 TMEM104Q8NE00 496 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 Q8NFD4 153 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 H1FXQ92522 213 aaKnown RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 RBMXL1Q96E39 390 aaKnown RBP6.43□□□□□ -1.38
USP4-207ENST00000462673 TVP23CQ96ET8 276 aa6.43□□□□□ -1.38
USP4-207ENST00000462673 SPACA5Q96QH8 159 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms