RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ATAD5Q96QE3 1844 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF638Q14966 1978 aaKnown RBP1.38□□□□□ -2.19
HDAC6-212ENST00000461608 OTOFQ9HC10 1997 aa1.38□□□□□ -2.19
HDAC6-212ENST00000461608 CECR2Q9BXF3 1484 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 COL18A1P39060 1754 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 IGHV3-15A0A0B4J1V0 119 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 TRGV4A0A0C4DH28 118 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 CXCR6O00574 342 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF189O75820 626 aaPredicted RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 APOMO95445 188 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 IFNA6P05013 189 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 SERPINA6P08185 405 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 CCL3P10147 92 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 CXCL2P19875 107 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 RPL12P30050 165 aaKnown RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 GNG10P50151 68 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 AP2S1P53680 142 aaPredicted RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 FXYD7P58549 80 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 TAS2R30P59541 319 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 POLR2GP62487 172 aaKnown RBP eCLIP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 FKBP1AP62942 108 aaKnown RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 REEP5Q00765 189 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 PPP1R1AQ13522 171 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 JOSD1Q15040 202 aaPredicted RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 RGS21Q2M5E4 152 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 STX12Q86Y82 276 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 C10orf67Q8IYJ2 551 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF567Q8N184 647 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 OR5C1Q8NGR4 320 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 LHFPL5Q8TAF8 219 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 RAB8BQ92930 207 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 MRPS24Q96EL2 167 aaKnown RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM109Q9BVC6 243 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 MRPS26Q9BYN8 205 aaKnown RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 MRPL40Q9NQ50 206 aaKnown RBP1.37□□□□□ -2.19
HDAC6-212ENST00000461608 MMACHCQ9Y4U1 282 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 NLRC5Q86WI3 1866 aa1.37□□□□□ -2.19
HDAC6-212ENST00000461608 MUC21A0A0G2JKD1 596 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 MUC21A0A140T8X8 626 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 A0A1B0GV50 99 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 C19orf71A6NCJ1 209 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 OR5K4A6NMS3 321 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 OR11H12B2RN74 326 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM114B3SHH9 223 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 C9JCJ5 164 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 M0R036 132 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 M0R381 172 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 TGOLN2O43493 480 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 NSA2O95478 260 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 NPYP01303 97 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 HLA-DQB2P05538 268 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 CTXN2P0C2S0 81 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 UCHL3P15374 230 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 CRYBB3P26998 211 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 RPL27AP46776 148 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 CTBP2P56545 445 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 RBM11P57052 281 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 TBPL1P62380 186 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 MRPS25P82663 173 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 GLO1Q04760 184 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 AKR1C1Q04828 323 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF181Q2M3W8 571 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 FAM229BQ4G0N7 80 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 SBSNQ6UWP8 590 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 RASSF6Q6ZTQ3 369 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 HIST2H3AQ71DI3 136 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 GLT6D1Q7Z4J2 308 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 BAP18Q8IXM2 172 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 UBL4BQ8N7F7 174 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 CNEP1R1Q8N9A8 125 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 TMEM161BQ8NDZ6 487 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 OR11H2Q8NH07 326 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 HAVCR2Q8TDQ0 301 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 C12orf43Q96C57 262 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 OPTNQ96CV9 577 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 CCDC42Q96M95 316 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 Q9BRP9 147 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 MIEN1Q9BRT3 115 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 ZNF471Q9BX82 626 aaPredicted RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 AK3Q9UIJ7 227 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 LSM5Q9Y4Y9 91 aaKnown RBP1.36□□□□□ -2.19
HDAC6-212ENST00000461608 MINOS1-NBL1R4GNA1 71 aa1.36□□□□□ -2.19
HDAC6-212ENST00000461608 LCTP09848 1927 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 ZFYVE9O95405 1425 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 A0A1W2PQL4 384 aaPredicted RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 C2orf74A8MZ97 194 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 GOLGA6L19H0YKK7 550 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 GNRH2O43555 120 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 RPP14O95059 124 aaKnown RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 SOD1P00441 154 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 IFNA5P01569 189 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CSRP1P21291 193 aaKnown RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 RPS12P25398 132 aaKnown RBP1.35□□□□□ -2.19
HDAC6-212ENST00000461608 HSD11B1P28845 292 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 SLCO1A2P46721 670 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 CAPZBP47756 277 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 GABRA2P47869 451 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 XCL1P47992 114 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 SERPINB9P50453 376 aa1.35□□□□□ -2.19
HDAC6-212ENST00000461608 NKX2-5P52952 324 aaPredicted RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms