RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CNTFRP26992 372 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 CD40LGP29965 261 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 PPP5CP53041 499 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 ZNF79Q15937 498 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 HACD4Q5VWC8 232 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 GTSCR1Q86UQ5 136 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 Q8N402 240 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 PLPPR1Q8TBJ4 325 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 FCAMRQ8WWV6 532 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 CMSS1Q9BQ75 279 aaKnown RBP13.21□□□□□ -0.29
TOP3A-202ENST00000461127 SRRQ9GZT4 340 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 SCPEP1Q9HB40 452 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 CHMP1AQ9HD42 196 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-202ENST00000461127 ETAA1Q9NY74 926 aa13.21□□□□□ -0.29
TOP3A-202ENST00000461127 J3QRK9 145 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 CTDSPLO15194 276 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 Q3ZCU0 254 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 TRIQKQ629K1 86 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 MINDY2Q8NBR6 621 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 NUDCD2Q8WVJ2 157 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 ARL11Q969Q4 196 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 TPSG1Q9NRR2 321 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 GFOD1Q9NXC2 390 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 AK3Q9UIJ7 227 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 KCNK7Q9Y2U2 307 aa13.2□□□□□ -0.3
TOP3A-202ENST00000461127 A0A1W2PN81 502 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 H0Y980 276 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 GABARAPH6UMI1 98 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 SULT1C2O00338 296 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 CA11O75493 328 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 CHRNA7P36544 502 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 INPP1P49441 399 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 ECSCRQ19T08 205 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 SMIM4Q8WVI0 70 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 CCDC32Q9BV29 185 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 KIAA1456Q9P272 454 aa13.19□□□□□ -0.3
TOP3A-202ENST00000461127 ELF5Q9UKW6 265 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-202ENST00000461127 FOXA2Q9Y261 457 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-202ENST00000461127 GSTZ1O43708 216 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-202ENST00000461127 CBX5P45973 191 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 ZNF137PP52743 207 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
TOP3A-202ENST00000461127 TCTEX1D1Q8N7M0 179 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 OR52I2Q8NH67 350 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 BORCS5Q969J3 196 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 RBMXL1Q96E39 390 aaKnown RBP13.18□□□□□ -0.3
TOP3A-202ENST00000461127 FAM110AQ9BQ89 295 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 ZNF251Q9BRH9 671 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-202ENST00000461127 RIMS4Q9H426 269 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-202ENST00000461127 RETNQ9HD89 108 aa13.18□□□□□ -0.3
TOP3A-202ENST00000461127 IGHV7-81A0A0B4J1V7 117 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 IGHV3-43A0A0B4J1X8 118 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 MEIS3P1A6NDR6 274 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 SSX5O60225 188 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 RBBP9O75884 186 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 IGHV3-43DP0DP04 118 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 ACTBP60709 375 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 LIN54Q6MZP7 749 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 SETD6Q8TBK2 473 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 GPX8Q8TED1 209 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 CYYR1Q96J86 154 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 HDHD3Q9BSH5 251 aaPredicted RBP13.17□□□□□ -0.3
TOP3A-202ENST00000461127 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 RAB9BQ9NP90 201 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 HERC2O95714 4834 aa13.17□□□□□ -0.3
TOP3A-202ENST00000461127 C15orf65H3BRN8 121 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 IGHV3-11P01762 117 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 C5orf64Q2M2E5 130 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 UBALD1Q8TB05 177 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 CASTOR1Q8WTX7 329 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 SDHCQ99643 169 aaPredicted RBP13.16□□□□□ -0.3
TOP3A-202ENST00000461127 GNG12Q9UBI6 72 aa13.16□□□□□ -0.3
TOP3A-202ENST00000461127 SLC31A2O15432 143 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 NBR2O15453 112 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 ORC5O43913 435 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 FCER2P06734 321 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 GSTT2BP0CG30 244 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 IL7P13232 177 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 DTYMKP23919 212 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 RCVRNP35243 200 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 SSBP1Q04837 148 aaKnown RBP13.15□□□□□ -0.3
TOP3A-202ENST00000461127 TMEM267Q0VDI3 215 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-202ENST00000461127 BAK1Q16611 211 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 ZNF57Q68EA5 555 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-202ENST00000461127 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 MTFP1Q9UDX5 166 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 TRAPPC2LQ9UL33 140 aa13.15□□□□□ -0.3
TOP3A-202ENST00000461127 LANCL1O43813 399 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 SOX15O60248 233 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 UPK1BO75841 260 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 RGS11O94810 467 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 NAPSAO96009 420 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 MT-ND4P03905 459 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 FCGR3AP08637 254 aa13.14□□□□□ -0.31
TOP3A-202ENST00000461127 ZP3P21754 424 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms