RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 HARBI1Q96MB7 349 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 CLCC1Q96S66 551 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 FBXO7Q9Y3I1 522 aa12.87□□□□□ -0.35
SMARCD3-204ENST00000460431 CA2P00918 260 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 IGLV1-40P01703 118 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 PF4P02776 101 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 CDX1P47902 265 aaPredicted RBP12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 TMBIM6P55061 237 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 RPL30P62888 115 aaKnown RBP12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 SPCS2Q15005 226 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 DHRS11Q6UWP2 260 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 OVCH2Q7RTZ1 564 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 PPP1R27Q86WC6 154 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 LYSMD2Q8IV50 215 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 ZNF695Q8IW36 515 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 RAB2BQ8WUD1 216 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 HSD17B10Q99714 261 aaKnown RBP12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 BCL7BQ9BQE9 202 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 SCPEP1Q9HB40 452 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 TPSG1Q9NRR2 321 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 PRELID3BQ9Y3B1 194 aa12.86□□□□□ -0.35
SMARCD3-204ENST00000460431 NUDT19A8MXV4 375 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 G3V4G9 280 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 CRYZL1O95825 349 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 RFX2P48378 723 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 TMEM267Q0VDI3 215 aaPredicted RBP12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 DYRK1AQ13627 763 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 BEAN1Q3B7T3 259 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 AKIRIN2Q53H80 203 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 SAMD5Q5TGI4 173 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 ETV3LQ6ZN32 361 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 C8orf86Q6ZUL3 223 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 KCTD9Q7L273 389 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 TCTEX1D1Q8N7M0 179 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 KLHL30-AS1Q8NEE0 82 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 OSR1Q8TAX0 266 aaPredicted RBP12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 MYOZ3Q8TDC0 251 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 SECTM1Q8WVN6 248 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 KLK15Q9H2R5 256 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 CCL28Q9NRJ3 127 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 ADAM30Q9UKF2 790 aa12.85□□□□□ -0.35
SMARCD3-204ENST00000460431 FAM25AB3EWG3 89 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 FAM25CB3EWG5 89 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 FAM25GB3EWG6 89 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 SULT1C2O00338 296 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 ARPC1BO15143 372 aaKnown RBP12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 FCGR3BO75015 233 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 CD33P20138 364 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 MYCNOSP40205 109 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 TAS2R46P59540 309 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 UBE2KP61086 200 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 SSBP2P81877 361 aaPredicted RBP12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 PJVKQ0ZLH3 352 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 KIAA0141Q14154 515 aaPredicted RBP12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 FXYD3Q14802 87 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 MRGPRG-AS1Q2M3A8 158 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 KPRPQ5T749 579 aaPredicted RBP12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 TMEM65Q6PI78 240 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 ZNF66Q6ZN08 573 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 MFSD4AQ8N468 514 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 TEX45Q8NA69 505 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 ZBTB34Q8NCN2 500 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 ABHD5Q8WTS1 349 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 SLC5A7Q9GZV3 580 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 EHFQ9NZC4 300 aa12.84□□□□□ -0.35
SMARCD3-204ENST00000460431 SOX15O60248 233 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 TPPPO94811 219 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 PMP2P02689 132 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 RAB9AP51151 201 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 BRWD1-AS2P59051 145 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 ECSCRQ19T08 205 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 VMA21Q3ZAQ7 101 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 MRPL41Q8IXM3 137 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 LFNGQ8NES3 379 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 OR5H2Q8NGV7 314 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 ARPC1AQ92747 370 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 UBE2E2Q96LR5 201 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 P2RX4Q99571 388 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 FAM103A1Q9BTL3 118 aaKnown RBP12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 TAS2R8Q9NYW2 309 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 FOXA2Q9Y261 457 aaPredicted RBP12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 A3GALT2U3KPV4 340 aa12.83□□□□□ -0.36
SMARCD3-204ENST00000460431 A0A1W2PN81 502 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 CNIH1O95406 144 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 CHRNA7P36544 502 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 FXYD4P59646 89 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 ACTBL2Q562R1 376 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 UNQ5815/PRO19632Q6UWF5 114 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 ZNF491Q8N8L2 437 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 DYNC2LI1Q8TCX1 351 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 C4orf3Q8WVX3 66 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 TCTEX1D2Q8WW35 142 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 RAX2Q96IS3 184 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 GPHA2Q96T91 129 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 DCUN1D5Q9BTE7 237 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 MIXL1Q9H2W2 232 aa12.82□□□□□ -0.36
SMARCD3-204ENST00000460431 EXTL2Q9UBQ6 330 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms