RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 RAB7AP51149 207 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 SELENOVP59797 346 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 COL5A1-AS1Q5SY13 56 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 LEMD1Q68G75 181 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 CEBPZOSA8MTT3 80 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 LRRC29Q8WV35 223 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 GAL3ST2Q9H3Q3 398 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 PSENENQ9NZ42 101 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 TUBD1Q9UJT1 453 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 PAM16Q9Y3D7 125 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 CACNA1BQ00975 2339 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 IGKV1-6A0A0C4DH72 117 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 CRYAAP02489 173 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 PNRC1Q12796 327 aaPredicted RBP13.01□□□□□ -0.33
LMNB1-203ENST00000460265 DCTN5Q9BTE1 182 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 OR51I2Q9H344 312 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 PSG11Q9UQ72 335 aa13.01□□□□□ -0.33
LMNB1-203ENST00000460265 A0A1B0GU03 582 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 CDS2O95674 445 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 S100A7P31151 101 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 RBX1P62877 108 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 ZNF506Q5JVG8 444 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 ABHD14BQ96IU4 210 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 IGSF23A1L1A6 192 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 LRP5LA4QPB2 252 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 LMO1P25800 156 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 CHRNB4P30926 498 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 Q6ZPA2 131 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 OR5T1Q8NG75 326 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 GPR146Q96CH1 333 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 CD55P08174 381 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 RND2P52198 227 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 UCP3P55916 312 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 Q6ZT83 130 aa13□□□□□ -0.33
LMNB1-203ENST00000460265 HBE1P02100 147 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 CD33P20138 364 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 IL24Q13007 206 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 INO80CQ6PI98 192 aaPredicted RBP12.99□□□□□ -0.33
LMNB1-203ENST00000460265 RBMXL1Q96E39 390 aaKnown RBP12.99□□□□□ -0.33
LMNB1-203ENST00000460265 ACY3Q96HD9 319 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 ZFP30Q9Y2G7 519 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 YLPM1P49750 1951 aaKnown RBP12.99□□□□□ -0.33
LMNB1-203ENST00000460265 ARFGEF3Q5TH69 2177 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 NAPSAO96009 420 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 CECR9P0C854 216 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 G6PCP35575 357 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 GABRA6Q16445 453 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 VPS25Q9BRG1 176 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 PCGF1Q9BSM1 259 aa12.99□□□□□ -0.33
LMNB1-203ENST00000460265 TMEM30CPA0ZSE6 113 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 ITGB1BP1O14713 200 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FGF8P55075 233 aaPredicted RBP12.98□□□□□ -0.33
LMNB1-203ENST00000460265 H7BYZ3 331 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 SSTR5P35346 364 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 LINC00205P59089 165 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM201AQ5SY85 155 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 Q8IYB0 196 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 SAXO1Q8IYX7 474 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 CLDND2Q8NHS1 167 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 DMXL1Q9Y485 3027 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A10PA6NDY2 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A18PA6NE21 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A16PA6NEW6 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A20PA6NIJ5 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A7PA6NKC0 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A22PA8MWA6 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A12PA8MX19 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A5PA8MXJ8 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A23PA8MXZ1 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A15PP0C7V4 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A13PP0C7W8 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A14PP0C7W9 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 FAM90A24PP0C7X0 464 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 MIEN1Q9BRT3 115 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 RSG1Q9BU20 258 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 CFAP47Q6ZTR5 3102 aa12.98□□□□□ -0.33
LMNB1-203ENST00000460265 PSPNO60542 156 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 BOD1Q96IK1 185 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 TMEM242Q9NWH2 141 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 PPIAL4AQ9Y536 164 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 CLEC18AA5D8T8 446 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 GALR1P47211 349 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 GNB2P62879 340 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 TESK1Q15569 626 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 C16orf82Q7Z2V1 217 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 CLEC18CQ8NCF0 446 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 LIN7CQ9NUP9 197 aaKnown RBP12.97□□□□□ -0.33
LMNB1-203ENST00000460265 KIR2DL5BA0A0G2JN68 375 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 KIR2DL5BA0A0G2JPC4 375 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 SPINT2O43291 252 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 SYNGR2O43760 224 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 CEACAM8P31997 349 aaPredicted RBP12.97□□□□□ -0.33
LMNB1-203ENST00000460265 KIR2DL2P43627 348 aaPredicted RBP12.97□□□□□ -0.33
LMNB1-203ENST00000460265 CATR1Q13166 79 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 KIR2DL5AQ8N109 375 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 GBGT1Q8N5D6 347 aa12.97□□□□□ -0.33
LMNB1-203ENST00000460265 PTPRQQ9UMZ3 2332 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms