RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 IGHV1-18A0A0C4DH31 117 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 A0A1W2PPV4 95 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PMS2P5A8MQ11 134 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 C17orf98A8MV24 154 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PPP5D1E7EU14 171 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 RAMP3O60896 148 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 CLN5O75503 358 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 WISP2O76076 250 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 HRASP01112 189 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 CRYABP02511 175 aaKnown RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 CD1BP29016 333 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 DUTP33316 252 aaKnown RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 GLRXP35754 106 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 OPRK1P41145 380 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 GATA4P43694 442 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 THBS3P49746 956 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 KLF3P57682 345 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 ERVFRD-1P60508 538 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 RPL30P62888 115 aaKnown RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 LCN2P80188 198 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PMP22Q01453 160 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 IZUMO4Q1ZYL8 232 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 IGFL3Q6UXB1 125 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 TMPRSS7Q7RTY8 843 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 C5orf24Q7Z6I8 188 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 CXorf67Q86X51 503 aaPredicted RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 RPP25LQ8N5L8 163 aaKnown RBP7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PRSS33Q8NF86 280 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 ACY3Q96HD9 319 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PFDN5Q99471 154 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PYGO2Q9BRQ0 406 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 ENY2Q9NPA8 101 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 ASCL3Q9NQ33 180 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 DOK5Q9P104 306 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 CLN8Q9UBY8 286 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 PSG11Q9UQ72 335 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 SLC25A15Q9Y619 301 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 ARHGAP21Q5T5U3 1957 aa7.38□□□□□ -1.23
HDAC3-202ENST00000459727 EP300Q09472 2414 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-202ENST00000459727 TRGV10A0A0A0MS01 117 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 A0A1W2PPE3 182 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 TM4SF5O14894 197 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 WNT9BO14905 357 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 TMPRSS2O15393 492 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 GALR2O43603 387 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BKO60814 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ZG16O60844 167 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 TNFSF13O75888 250 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 CGAP01215 116 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BJP06899 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 CXCL1P09341 107 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 FTH1P19P0C7X4 201 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BOP23527 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BBP33778 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 SSTR5P35346 364 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 CEBPDP49716 269 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-202ENST00000459727 FABP6P51161 128 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 NDUFA6P56556 154 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BDP58876 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BCP62807 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 RPL19P84098 196 aaKnown RBP7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HNF4GQ14541 408 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ADIRFQ15847 76 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST2H2BEQ16778 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ALKBH6Q3KRA9 238 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 MORN2Q502X0 79 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ATP1A1-AS1Q5TC04 95 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ACSM6Q6P461 480 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 Q6ZR03 302 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF826PQ6ZT77 177 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 OR2Z1Q8NG97 314 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 OR13A1Q8NGR1 328 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BHQ93079 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 RAB24Q969Q5 203 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BNQ99877 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 HIST1H2BMQ99879 126 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 PARLQ9H300 379 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 SLC25A22Q9H936 323 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 RFNGQ9Y644 331 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 DOCK10Q96BY6 2186 aa7.37□□□□□ -1.23
HDAC3-202ENST00000459727 SETXQ7Z333 2677 aaKnown RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 ZZEF1O43149 2961 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 SHANK1Q9Y566 2161 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 TRAV9-1A0A075B6T8 112 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 TGIF2-C20orf24A0A0A6YYL0 155 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 ZNF729A6NN14 1252 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 C15orf62A8K5M9 175 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 M0R1X1 148 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 ZNHIT1O43257 154 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 CXorf1O96002 111 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 IFNA10P01566 189 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 TYMSP04818 313 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FBP1P09467 338 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 TIMP3P35625 211 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 GALR1P47211 349 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FGF8P55075 233 aaPredicted RBP7.36□□□□□ -1.23
HDAC3-202ENST00000459727 TCF15Q12870 199 aa7.36□□□□□ -1.23
HDAC3-202ENST00000459727 FOXF2Q12947 444 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms