RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 AGFG2O95081 481 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 NXPH2O95156 264 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 EGR1P18146 543 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 MDH2P40926 338 aaKnown RBP11.48□□□□□ -0.57
TOP3B-213ENST00000457179 KRTDAPP60985 99 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 SELENOTP62341 195 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 BAXQ07812 192 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 MDS2Q8NDY4 140 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 BTF3L4Q96K17 158 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 SLC25A22Q9H936 323 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 SLC39A9Q9NUM3 307 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 KIAA1549Q9HCM3 1950 aa11.48□□□□□ -0.57
TOP3B-213ENST00000457179 M0QZ24 198 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 PIP4P1Q86T03 277 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 CXorf67Q86X51 503 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-213ENST00000457179 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 PRSS33Q8NF86 280 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 LOC102724200A0A096LPH7 203 aaPredicted RBP11.47□□□□□ -0.57
TOP3B-213ENST00000457179 NKX6-3A6NJ46 265 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 CDKN1BP46527 198 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 UNQ5815/PRO19632Q6UWF5 114 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 TEX43Q6ZNM6 134 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 SELENOHQ8IZQ5 122 aaKnown RBP11.47□□□□□ -0.57
TOP3B-213ENST00000457179 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 TACC2O95359 2948 aa11.47□□□□□ -0.57
TOP3B-213ENST00000457179 hCG_38984A0A1B0GV85 526 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 DNPH1O43598 174 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 PPYP01298 95 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 ADMP35318 185 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 TPPP2P59282 170 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 MALLQ13021 153 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 Q6ZN92 141 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 Q6ZPA2 131 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 LHFPL2Q6ZUX7 228 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 MRPL52Q86TS9 123 aaKnown RBP11.46□□□□□ -0.57
TOP3B-213ENST00000457179 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
TOP3B-213ENST00000457179 TM4SF5O14894 197 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
TOP3B-213ENST00000457179 RANP62826 216 aaKnown RBP11.46□□□□□ -0.57
TOP3B-213ENST00000457179 RNF115Q9Y4L5 304 aa11.46□□□□□ -0.57
TOP3B-213ENST00000457179 K7EM74 188 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 BCL3P20749 454 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 CA6P23280 308 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 PAX9P55771 341 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 PPP1CBP62140 327 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 ZDHHC11Q9H8X9 412 aa11.46□□□□□ -0.58
TOP3B-213ENST00000457179 ZNF71Q9NQZ8 489 aaPredicted RBP11.46□□□□□ -0.58
TOP3B-213ENST00000457179 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
TOP3B-213ENST00000457179 TRAV39A0A0B4J263 110 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 C1QTNF9BB2RNN3 333 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 SERF1AO75920 110 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 PSMB3P49720 205 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 KLF3P57682 345 aaPredicted RBP11.45□□□□□ -0.58
TOP3B-213ENST00000457179 FOXC1Q12948 553 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 RIPPLY2Q5TAB7 128 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 MDP1Q86V88 176 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 WDYHV1Q96HA8 205 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 TNRC6AQ8NDV7 1962 aaKnown RBP11.45□□□□□ -0.58
TOP3B-213ENST00000457179 PGPEP1LA6NFU8 196 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 HS3ST1O14792 307 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 TMEM11P17152 192 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
TOP3B-213ENST00000457179 FOXF2Q12947 444 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 ATP6V1FQ16864 119 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 MAJINQ3KP22 176 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 VWA1Q6PCB0 445 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 GAPTQ8N292 157 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 OR4C5Q8NGB2 326 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 OR1K1Q8NGR3 316 aa11.45□□□□□ -0.58
TOP3B-213ENST00000457179 ZNF816-ZNF321PA0A0X1KG74 233 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 DUXBA0A1W2PPF3 345 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 DEFA4P12838 97 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 FUT6P51993 359 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 UBE2NP61088 152 aaKnown RBP11.44□□□□□ -0.58
TOP3B-213ENST00000457179 SRPXP78539 464 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 SPATA45Q537H7 98 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 BAGE3Q86Y29 109 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 BAGE2Q86Y30 109 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 MBD3L1Q8WWY6 194 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 RDH5Q92781 318 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 ANAPC16Q96DE5 110 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 CACNA1AO00555 2505 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 UBE2L5PA0A1B0GUS4 154 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 F2Z2F3 143 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 YPEL1O60688 119 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 PDCD6O75340 191 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 ID3Q02535 119 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 ARL16Q0P5N6 197 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 ZNF818PQ6ZRF7 136 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 OR5AU1Q8NGC0 362 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 YPEL2Q96QA6 119 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 LRBAP50851 2863 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 RPL15P61313 204 aaKnown RBP11.44□□□□□ -0.58
TOP3B-213ENST00000457179 PRDX4Q13162 271 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
TOP3B-213ENST00000457179 PARD6GQ9BYG4 376 aaPredicted RBP11.44□□□□□ -0.58
TOP3B-213ENST00000457179 A0A0G2JRQ6 117 aa11.43□□□□□ -0.58
TOP3B-213ENST00000457179 CRYAAP02489 173 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms