RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
USP39-208ENST00000455732 AADACP22760 399 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 TMBIM6P55061 237 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 KCTD9Q7L273 389 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 PPP1R27Q86WC6 154 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 CLVS1Q8IUQ0 354 aaPredicted RBP13.56□□□□□ -0.24
USP39-208ENST00000455732 TCTEX1D1Q8N7M0 179 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 OSR1Q8TAX0 266 aaPredicted RBP13.56□□□□□ -0.24
USP39-208ENST00000455732 GIMAP1Q8WWP7 306 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 HSD17B10Q99714 261 aaKnown RBP13.56□□□□□ -0.24
USP39-208ENST00000455732 TPSG1Q9NRR2 321 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 PRELID3BQ9Y3B1 194 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 FBXO7Q9Y3I1 522 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 WSB1Q9Y6I7 421 aa13.56□□□□□ -0.24
USP39-208ENST00000455732 SHOXO15266 292 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 TPPPO94811 219 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 CA2P00918 260 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 PF4P02776 101 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 FCER2P06734 321 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 EGR2P11161 476 aaPredicted RBP13.55□□□□□ -0.24
USP39-208ENST00000455732 TAS2R46P59540 309 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 SPCS2Q15005 226 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 ETV3LQ6ZN32 361 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 ZNF695Q8IW36 515 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 KLHL30-AS1Q8NEE0 82 aa13.55□□□□□ -0.24
USP39-208ENST00000455732 MRPS7Q9Y2R9 242 aaKnown RBP13.55□□□□□ -0.24
USP39-208ENST00000455732 SRRM4A7MD48 611 aaKnown RBP13.54□□□□□ -0.24
USP39-208ENST00000455732 SULT1C2O00338 296 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 CRYZL1O95825 349 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 CD33P20138 364 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 CDX1P47902 265 aaPredicted RBP13.54□□□□□ -0.24
USP39-208ENST00000455732 UBE2KP61086 200 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 RPL30P62888 115 aaKnown RBP13.54□□□□□ -0.24
USP39-208ENST00000455732 DYRK1AQ13627 763 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 ZNF66Q6ZN08 573 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 ZBTB34Q8NCN2 500 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 EHFQ9NZC4 300 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 CCDC59Q9P031 241 aaKnown RBP13.54□□□□□ -0.24
USP39-208ENST00000455732 NUBP2Q9Y5Y2 271 aa13.54□□□□□ -0.24
USP39-208ENST00000455732 NUDT19A8MXV4 375 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 SSBP2P81877 361 aaPredicted RBP13.53□□□□□ -0.24
USP39-208ENST00000455732 TMEM267Q0VDI3 215 aaPredicted RBP13.53□□□□□ -0.24
USP39-208ENST00000455732 ECSCRQ19T08 205 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 VMA21Q3ZAQ7 101 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 AKIRIN2Q53H80 203 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 DHRS11Q6UWP2 260 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 LCNL1Q6ZST4 164 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 C8orf86Q6ZUL3 223 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 SNX29P2Q8IUI4 249 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 TEX45Q8NA69 505 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 SECTM1Q8WVN6 248 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 ARPC1AQ92747 370 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
USP39-208ENST00000455732 FOXA2Q9Y261 457 aaPredicted RBP13.53□□□□□ -0.24
USP39-208ENST00000455732 FAM25AB3EWG3 89 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 FAM25CB3EWG5 89 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 FAM25GB3EWG6 89 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
USP39-208ENST00000455732 FCGR3BO75015 233 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 IGLL1P15814 213 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 RCVRNP35243 200 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 MYCNOSP40205 109 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 RFX2P48378 723 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 FXYD3Q14802 87 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 PYHIN1Q6K0P9 492 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 LYSMD2Q8IV50 215 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 MFSD4AQ8N468 514 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 LINC00482Q8N8I6 264 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 OR5H2Q8NGV7 314 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 OR4S2Q8NH73 311 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 DYNC2LI1Q8TCX1 351 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 ABHD5Q8WTS1 349 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 C4orf3Q8WVX3 66 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 TCTEX1D2Q8WW35 142 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 P2RX4Q99571 388 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 SLC5A7Q9GZV3 580 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 TAS2R8Q9NYW2 309 aa13.52□□□□□ -0.25
USP39-208ENST00000455732 SOX15O60248 233 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 NOL3O60936 208 aaKnown RBP13.51□□□□□ -0.25
USP39-208ENST00000455732 PRB2P02812 416 aaPredicted RBP13.51□□□□□ -0.25
USP39-208ENST00000455732 KIR2DS2P43631 304 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 BRWD1-AS2P59051 145 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 HERV-K104P61576 105 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 PJVKQ0ZLH3 352 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 KIAA0141Q14154 515 aaPredicted RBP13.51□□□□□ -0.25
USP39-208ENST00000455732 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 TMEM65Q6PI78 240 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 MRPL41Q8IXM3 137 aaKnown RBP13.51□□□□□ -0.25
USP39-208ENST00000455732 OR5M8Q8NGP6 311 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 C15orf40Q8WUR7 153 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 BORCS5Q969J3 196 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 MOB3AQ96BX8 217 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 UBE2E2Q96LR5 201 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 FAM103A1Q9BTL3 118 aaKnown RBP13.51□□□□□ -0.25
USP39-208ENST00000455732 KLK15Q9H2R5 256 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 MIXL1Q9H2W2 232 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
USP39-208ENST00000455732 SCOCQ9UIL1 159 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms