RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 KIAA2026Q5HYC2 2103 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 ZNF645Q8N7E2 425 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 CCL13Q99616 98 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 CMSS1Q9BQ75 279 aaKnown RBP3.97□□□□□ -1.77
RIF1-207ENST00000454583 SPACA1Q9HBV2 294 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 IFT46Q9NQC8 304 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 SPTBN2O15020 2390 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 L7N2F9 121 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 HTR3BO95264 441 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 CTXN2P0C2S0 81 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 ZNF728P0DKX0 622 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 TNFRSF1AP19438 455 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 RUSC1-AS1Q66K80 236 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 DHRS7BQ6IAN0 325 aaPredicted RBP3.97□□□□□ -1.77
RIF1-207ENST00000454583 ZNF383Q8NA42 475 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 RTN4IP1Q8WWV3 396 aaPredicted RBP3.97□□□□□ -1.77
RIF1-207ENST00000454583 SCGB3A2Q96PL1 93 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 DUSP13Q9UII6 198 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 KPTNQ9Y664 436 aa3.97□□□□□ -1.77
RIF1-207ENST00000454583 PTPN13Q12923 2485 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 UBE2QL1A1L167 161 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PSMB11A5LHX3 300 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SRRM4A7MD48 611 aaKnown RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 GPR31O00270 319 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SH2D1BO14796 132 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 GPR137BO60478 399 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 FOLR2P14207 255 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 INPP1P49441 399 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 LUMP51884 338 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 DSCR9P59020 149 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 C6orf183Q5T699 404 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 TRAT1Q6PIZ9 186 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 OR10G4Q8NGN3 311 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PCGF1Q9BSM1 259 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 CHIAQ9BZP6 476 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 CCL28Q9NRJ3 127 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 CALYQ9NYX4 217 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 MALRD1Q5VYJ5 2156 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 A0A1B0GU03 582 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 F8W735 103 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 RBFOX2O43251 390 aaKnown RBP eCLIP3.96□□□□□ -1.781e-6■■□□□ 12.9
RIF1-207ENST00000454583 GRPP07492 148 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 AKR1C4P17516 323 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PRTN3P24158 256 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 DUSP1P28562 367 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SNCAP37840 140 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 GUCA1AP43080 201 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 VDAC2P45880 294 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 CAV2P51636 162 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 LINC00205P59089 165 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SCGB2B2Q4G0G5 96 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 NCR3LG1Q68D85 454 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 IL34Q6ZMJ4 242 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 DRAM1Q8N682 238 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 RNF152Q8N8N0 203 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 ZBTB34Q8NCN2 500 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 GPR146Q96CH1 333 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 RBMXL1Q96E39 390 aaKnown RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 CCL19Q99731 98 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PLEKHA2Q9HB19 425 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 IDI2-AS1Q9NZ38 188 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 MIOXQ9UGB7 285 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 CACFD1Q9UGQ2 172 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 LAMP3Q9UQV4 416 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 BAHCC1Q9P281 2608 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 VWFP04275 2813 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 FAM208BQ5VWN6 2430 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SAA2-SAA4A0A096LPE2 208 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 FAM90A26D6RGX4 464 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 WIPF1O43516 503 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 SAA2P0DJI9 122 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 DVL1P1P54792 670 aaPredicted RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 SLC9A3R2Q15599 337 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 TMEM177Q53S58 311 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 RPL7L1Q6DKI1 246 aaKnown RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 FIP1L1Q6UN15 594 aaKnown RBP3.96□□□□□ -1.78
RIF1-207ENST00000454583 ALKAL2Q6UX46 152 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 BAP18Q8IXM2 172 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 BATF2Q8N1L9 274 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 TCTEX1D1Q8N7M0 179 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 OR1S2Q8NGQ3 325 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 COQ8AQ8NI60 647 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PCDHB16Q9NRJ7 776 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 FBXL17Q9UF56 701 aa3.96□□□□□ -1.78
RIF1-207ENST00000454583 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.95□□□□□ -1.787e-7■■■■■ 50.1
RIF1-207ENST00000454583 SETXQ7Z333 2677 aaKnown RBP3.95□□□□□ -1.78
RIF1-207ENST00000454583 IGHV2-26A0A0B4J1V2 119 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 TRAV38-1A0A0B4J264 116 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 TMEM30CPA0ZSE6 113 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 E7EUB6 86 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 H0YJW9 148 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 BUB1B-PAK6H3BSN5 160 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 RAMP3O60896 148 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 SLC25A16P16260 332 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 CCL3L1P16619 93 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 KIR2DS4P43632 304 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 KIR2DS1Q14954 304 aa3.95□□□□□ -1.78
RIF1-207ENST00000454583 HLA-DRB5Q30154 266 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms