RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ITLN1Q8WWA0 313 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 ABHD14BQ96IU4 210 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGF2BP2-AS1Q96M15 143 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 F2RL3Q96RI0 385 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 THTPAQ9BU02 230 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 SAMD10Q9BYL1 202 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 MED28Q9H204 178 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 PDFQ9HBH1 243 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TMEM38BQ9NVV0 291 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 RPUSD1Q9UJJ7 312 aaKnown RBP3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 DNAJC12Q9UKB3 198 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 PROCRQ9UNN8 238 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 CYSLTR1Q9Y271 337 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 MED31Q9Y3C7 131 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 PYGO1Q9Y3Y4 419 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 TTC3P53804 2025 aa3.31□□□□□ -1.88
HMGB3P21-201ENST00000452483 NOS1P29475 1434 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 PMS2P5A8MQ11 134 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 J3QR89 54 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 DNASE2O00115 360 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 APOMO95445 188 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 CXorf1O96002 111 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 TOMM40O96008 361 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 PSG2P11465 335 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 KDELR1P24390 212 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 S100A11P31949 105 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 LINC01547P58512 204 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 TMEM69Q5SWH9 247 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 DNLZQ5SXM8 178 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 C9orf57Q5W0N0 161 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 PRSS54Q6PEW0 395 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 HRCT1Q6UXD1 115 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF433Q8N7K0 673 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 C9orf106Q8NAJ2 232 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 FAIMQ9NVQ4 179 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 MRPL16Q9NX20 251 aaKnown RBP3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 TVP23BQ9NYZ1 205 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 NAT8BQ9UHF3 227 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 COQ4Q9Y3A0 265 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 NAV1Q8NEY1 1877 aa3.3□□□□□ -1.88
HMGB3P21-201ENST00000452483 DENND4BO75064 1496 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGHV3OR16-10A0A075B7F0 116 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 TRAV5A0A0B4J249 113 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A0J9YY10 115 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A1B0GX78 115 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 FABP5P3A8MUU1 101 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 KRBOX1C9JBD0 128 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 J3QRK9 145 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF253O75346 499 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 SCTP09683 121 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 BCL2P10415 239 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 NTF3P20783 257 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 S100A2P29034 98 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 CDKN2AP42771 156 aaKnown RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 LPAR6P43657 344 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 PPP3R1P63098 170 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 RELAQ04206 551 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 LOXL1Q08397 574 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 DHRS2Q13268 280 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 ELOCQ15369 112 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 EBLN2Q6P2I7 272 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 Q6Q795 121 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF645Q8N7E2 425 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 MS4A6EQ96DS6 147 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 GNPNAT1Q96EK6 184 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 AP1S3Q96PC3 154 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF471Q9BX82 626 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR2J1Q9GZK6 312 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 OR8D2Q9GZM6 311 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 IFI27L2Q9H2X8 130 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 FBXL12Q9NXK8 326 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 AMMECR1Q9Y4X0 333 aaPredicted RBP3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 WDR62O43379 1518 aa3.29□□□□□ -1.88
HMGB3P21-201ENST00000452483 SSH2Q76I76 1423 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 LOC102724200A0A096LPH7 203 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 IGHV3-74A0A0B4J1X5 117 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TMEM269A0A1B0GVZ9 245 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 A0A1B0GW64 132 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 DHRS12A0PJE2 317 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 C9JQL5 133 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 BCL2L11O43521 198 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 CD5LO43866 347 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 PPP1R3DO95685 299 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TDGF1P13385 188 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 AZU1P20160 251 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 FGF7P21781 194 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 CCR2P41597 374 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 CA7P43166 264 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF83P51522 516 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TDGF1P3P51864 188 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 RPS25P62851 125 aaKnown RBP3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 CXCL6P80162 114 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 TMEM241Q24JQ0 296 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 FKBP1CQ5VVH2 108 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 GLT8D1Q68CQ7 371 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 ZNF497Q6ZNH5 498 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 Q6ZS49 121 aa3.28□□□□□ -1.88
HMGB3P21-201ENST00000452483 RNF165Q6ZSG1 346 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms