RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 HTR1DP28221 377 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 DEFA6Q01524 100 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 UTF1Q5T230 341 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 MINOS1Q5TGZ0 78 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 LIAT1Q6ZQX7 453 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 OR4D10Q8NGI6 311 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 OR4P4Q8NGL7 312 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 TERB2Q8NHR7 220 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 LEAP2Q969E1 77 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 MINOS1-NBL1R4GNA1 71 aa13.66□□□□□ -0.22
PRPF40A-204ENST00000450303 IGHV3-7P01780 117 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF735P0CB33 412 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 CXCL3P19876 107 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 CD24P25063 80 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 TAS2R31P59538 309 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 FXYD4P59646 89 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF660Q6AZW8 331 aaPredicted RBP13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 SLC25A48Q6ZT89 311 aaKnown RBP13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 ZNF767PQ75MW2 155 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 OR10X1Q8NGY0 326 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 MOB3AQ96BX8 217 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 PIPOXQ9P0Z9 390 aa13.65□□□□□ -0.22
PRPF40A-204ENST00000450303 SMLR1H3BR10 107 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 OR8U9P0C7N5 309 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 PGAM2P15259 253 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 S100GP29377 79 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 CEACAM3P40198 252 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 HLA-DRB5Q30154 266 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 CT45A1Q5HYN5 189 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 C11orf88Q6PI97 169 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 Q6ZS46 218 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 ZNF439Q8NDP4 499 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 OR2T35Q8NGX2 323 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 OR8U1Q8NH10 309 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 CT45A3Q8NHU0 189 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 SLC5A7Q9GZV3 580 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 DPM3Q9P2X0 92 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 PITPNC1Q9UKF7 332 aa13.64□□□□□ -0.23
PRPF40A-204ENST00000450303 A0A1W2PPE3 182 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 RAB29O14966 203 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 ST8SIA5O15466 376 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 GPR12P47775 334 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 DYNLT3P51808 116 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 UCP3P55916 312 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 BLCAPP62952 87 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 SURF2Q15527 256 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 LIN54Q6MZP7 749 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 FAM53AQ6NSI3 398 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 TMED4Q7Z7H5 227 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 LHFPL1Q86WI0 220 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 LYG1Q8N1E2 194 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 C9orf62Q8N4C0 152 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 C12orf45Q8N5I9 185 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 SECTM1Q8WVN6 248 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 TOMM40LQ969M1 308 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 PRSS22Q9GZN4 317 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 OR2D2Q9H210 308 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 PLSCR3Q9NRY6 295 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 SERTAD4Q9NUC0 356 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 GAB2Q9UQC2 676 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
PRPF40A-204ENST00000450303 OR5H14A6NHG9 310 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 LEUTXA8MZ59 168 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 IGLV1-47P01700 117 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 OR4E1P0C645 316 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 S100A1P23297 94 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 ZNF134P52741 427 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 MSMO1Q15800 293 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 C2orf68Q2NKX9 166 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 ARSJQ5FYB0 599 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 SLC38A6Q8IZM9 456 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 ZNF645Q8N7E2 425 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 UXS1Q8NBZ7 420 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 ZBTB34Q8NCN2 500 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 AKR1E2Q96JD6 320 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 S1PR3Q99500 378 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 RNF150Q9ULK6 438 aa13.62□□□□□ -0.23
PRPF40A-204ENST00000450303 BUB1B-PAK6H3BSN5 160 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 SLC31A2O15432 143 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 OR2A4O95047 310 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 UBE2MP61081 183 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 TMEM95Q3KNT9 176 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 FBLN7Q53RD9 439 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 AADACL3Q5VUY0 350 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 CMTM1Q8IZ96 169 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 Q8N2B8 174 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 CFHR4Q92496 578 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 ABHD14BQ96IU4 210 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 OR2A7Q96R45 310 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 AGMATQ9BSE5 352 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 PARP12Q9H0J9 701 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 FXYD6Q9H0Q3 95 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 IFI27L2Q9H2X8 130 aa13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 C14orf166Q9Y224 244 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-204ENST00000450303 IGKV1D-13A0A0B4J2D9 117 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 GOSR2O14653 212 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 IGKV1-13P0DP09 117 aa13.6□□□□□ -0.23
PRPF40A-204ENST00000450303 CD28P10747 220 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms