RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
USP39-207ENST00000450066 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
USP39-207ENST00000450066 NXPH3O95157 252 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 HTR2BP41595 481 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 ARHGDIBP52566 201 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 STOML3Q8TAV4 291 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 ST6GALNAC6Q969X2 333 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 RAB40CQ96S21 281 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 CYTL1Q9NRR1 136 aa11.63□□□□□ -0.55
USP39-207ENST00000450066 IGHV2-26A0A0B4J1V2 119 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 SYNGR2O43760 224 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 TMEM50AO95807 157 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 IGHV2-5P01817 119 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 PDLIM4P50479 330 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 PRRX1P54821 245 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 ERVK-16P61578 105 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 TAGLNQ01995 201 aaKnown RBP11.62□□□□□ -0.55
USP39-207ENST00000450066 DHRS7BQ6IAN0 325 aaPredicted RBP11.62□□□□□ -0.55
USP39-207ENST00000450066 OR8H3Q8N146 312 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 ONECUT1Q9UBC0 465 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 HSPB7Q9UBY9 170 aa11.62□□□□□ -0.55
USP39-207ENST00000450066 M0R1W7 72 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 CRYZL1O95825 349 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 IGLV1-47P01700 117 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 CAV2P51636 162 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 RTL8BQ17RB0 113 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 SCARB1Q8WTV0 552 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 PHYHIPLQ96FC7 376 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 CLEC7AQ9BXN2 247 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 BPESC1Q9GZL8 116 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 WSB1Q9Y6I7 421 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 A1L4Q6 167 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 IL3RAP26951 378 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 PAX9P55771 341 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 TNFRSF9Q07011 255 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 AARDQ4LEZ3 155 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 ALKAL2Q6UX46 152 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 BEND2Q8NDZ0 799 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 OR5AN1Q8NGI8 311 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 MRPL20Q9BYC9 149 aaKnown RBP11.61□□□□□ -0.55
USP39-207ENST00000450066 SLC25A31Q9H0C2 315 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 FBXL17Q9UF56 701 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 ITGB1BP2Q9UKP3 347 aa11.61□□□□□ -0.55
USP39-207ENST00000450066 FAM24AA6NFZ4 105 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 HRASP01112 189 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 RRASP10301 218 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 TPT1P13693 172 aaKnown RBP11.6□□□□□ -0.55
USP39-207ENST00000450066 UBE2KP61086 200 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 EWSR1Q01844 656 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP39-207ENST00000450066 C1orf122Q6ZSJ8 110 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 ZNF295-AS1Q8N0V1 137 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 TMEM252Q8N6L7 170 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 Q8N7P7 452 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 GSX2Q9BZM3 304 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 BARX1Q9HBU1 254 aaPredicted RBP11.6□□□□□ -0.55
USP39-207ENST00000450066 SLC35D1Q9NTN3 355 aa11.6□□□□□ -0.55
USP39-207ENST00000450066 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 MED6O75586 246 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 APOA2P02652 100 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 GAPDHP04406 335 aaKnown RBP11.59□□□□□ -0.55
USP39-207ENST00000450066 ZFP36P26651 326 aaKnown RBP11.59□□□□□ -0.55
USP39-207ENST00000450066 TAS2R30P59541 319 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 RAB14P61106 215 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 LMO4P61968 165 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 ARF6P62330 175 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 RPL23AP62750 156 aaKnown RBP11.59□□□□□ -0.55
USP39-207ENST00000450066 NHLH2Q02577 135 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 POU2AF1Q16633 256 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 HLA-DRB5Q30154 266 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 BAP18Q8IXM2 172 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 VKORC1L1Q8N0U8 176 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 KIR3DL3Q8N743 410 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 SMIM8Q96KF7 97 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 RHOVQ96L33 236 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 PCGF1Q9BSM1 259 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 CENPEQ02224 2701 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 H0YJW9 148 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 ATP6V1G1O75348 118 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 JTBO76095 146 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 IGKV1-16P04430 117 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 OR9G9P0C7N8 305 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 REG1BP48304 166 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 EIF5AP63241 154 aaKnown RBP11.59□□□□□ -0.55
USP39-207ENST00000450066 BAXQ07812 192 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 SSX9Q7RTT3 188 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 TGIF2LXQ8IUE1 241 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 SLC7A5P1Q8MH63 180 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 CLDND2Q8NHS1 167 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 NABP2Q9BQ15 211 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 AIFM2Q9BRQ8 373 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 TMEM140Q9NV12 185 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 CACFD1Q9UGQ2 172 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 TENM4Q6N022 2769 aa11.59□□□□□ -0.55
USP39-207ENST00000450066 USP9YO00507 2555 aaPredicted RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 A8MXK9 166 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 BUB1B-PAK6H3BSN5 160 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 NDUFS8O00217 210 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 ENSAO43768 121 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms