RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 OR4X2Q8NGF9 303 aa11.09□□□□□ -0.63
GTF3C3-206ENST00000448539 SMIM4Q8WVI0 70 aa11.09□□□□□ -0.63
GTF3C3-206ENST00000448539 DDB2Q92466 427 aa11.09□□□□□ -0.63
GTF3C3-206ENST00000448539 NOL4LQ96MY1 436 aaPredicted RBP11.09□□□□□ -0.63
GTF3C3-206ENST00000448539 GON7Q9BXV9 100 aa11.09□□□□□ -0.63
GTF3C3-206ENST00000448539 M0QYG6 137 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 M0QZ24 198 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 TNFSF12O43508 249 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 SLC25A17O43808 307 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 IGLV2-14P01704 120 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 HLA-DRB1P01911 266 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 CD3DP04234 171 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 CSF1P09603 554 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 S100GP29377 79 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 KIR2DS2P43631 304 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 VMA21Q3ZAQ7 101 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 TMEM177Q53S58 311 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 OR2B11Q5JQS5 317 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 ZNF660Q6AZW8 331 aaPredicted RBP11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 LPCAT3Q6P1A2 487 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 CMTM1Q8IZ96 169 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 STPG2Q8N412 459 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 TMEM229BQ8NBD8 167 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 OR4S2Q8NH73 311 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 OSR1Q8TAX0 266 aaPredicted RBP11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 CLCC1Q96S66 551 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 LINC00527Q9UJ94 153 aa11.08□□□□□ -0.64
GTF3C3-206ENST00000448539 LINC01548A6NM66 108 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 RAB3DO95716 219 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 CD28P10747 220 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 VDAC1P21796 283 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 RPL30P62888 115 aaKnown RBP11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 AADACL3Q5VUY0 350 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 STEAP1BQ6NZ63 245 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 ZNF818PQ6ZRF7 136 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 ZNF329Q86UD4 541 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 POC5Q8NA72 575 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 ABHD5Q8WTS1 349 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 TINAGL1Q9GZM7 467 aaPredicted RBP11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 OR51J1Q9H342 316 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
GTF3C3-206ENST00000448539 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 GPR31O00270 319 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 GSTZ1O43708 216 aaPredicted RBP11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 OPN1MWP04001 364 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 GNRHRP30968 328 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 EIF4EBP1Q13541 118 aaPredicted RBP11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 MEF2DQ14814 521 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 C2orf68Q2NKX9 166 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 PYDC2Q56P42 97 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 KHDC1LQ5JSQ8 128 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 SPANXN2Q5MJ10 180 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 ARRDC1Q8N5I2 433 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 OR51H1Q8NH63 302 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 GPHA2Q96T91 129 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
GTF3C3-206ENST00000448539 TCRBV4S1A1TA0A5B7 111 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 FCN1O00602 326 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 ATP6V0E1O15342 81 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CNIH1O95406 144 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CA2P00918 260 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CD74P04233 296 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 IGF1P05019 195 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 PGAM2P15259 253 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 UBE2KP61086 200 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CX3CL1P78423 397 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 SCGB2B2Q4G0G5 96 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 PPP1R27Q86WC6 154 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 SLC38A6Q8IZM9 456 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 SPAG16Q8N0X2 631 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 COMMD1Q8N668 190 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CD300LFQ8TDQ1 290 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 CITED2Q99967 270 aaPredicted RBP11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 SOSTQ9BQB4 213 aa11.05□□□□□ -0.64
GTF3C3-206ENST00000448539 SRRM4A7MD48 611 aaKnown RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 DISC1C4P0D8 188 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 CREBL2O60519 120 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 PGLYRP1O75594 196 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 HRASP01112 189 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 AKAIN1P0CW23 69 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 PTBP1P26599 531 aaKnown RBP eCLIP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 UCP3P55916 312 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 GNB1P62873 340 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 TMEM267Q0VDI3 215 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 FOXB2Q5VYV0 432 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 TEX38Q6PEX7 206 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 C10orf99Q6UWK7 81 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 ZNF562Q6V9R5 426 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 VSTM2AQ8TAG5 236 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 AIFM2Q9BRQ8 373 aa11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 THAP7Q9BT49 309 aaPredicted RBP11.04□□□□□ -0.64
GTF3C3-206ENST00000448539 TPSG1Q9NRR2 321 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms