RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 TP53RKQ96S44 253 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 NAA60Q9H7X0 242 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 LIN7CQ9NUP9 197 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 TCF19Q9Y242 345 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 NUBP2Q9Y5Y2 271 aa14.4□□□□□ -0.1
TRAPPC4-203ENST00000447216 C3orf85A0A1B0GTC6 90 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 A6NDX4 124 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 BTBD17A6NE02 478 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 MOSP00540 346 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 FAM106CPP0CH98 169 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 VSIG10L2P0DP72 767 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 RRASP10301 218 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 CNTFRP26992 372 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 KIR2DS2P43631 304 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 RPS16P62249 146 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 EBI3Q14213 229 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 SLC9A3R2Q15599 337 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 SLC25A42Q86VD7 318 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 THNSL2Q86YJ6 484 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR5R1Q8NH85 324 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 PRR13Q9NZ81 148 aa14.39□□□□□ -0.11
TRAPPC4-203ENST00000447216 TNCP24821 2201 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 H0Y980 276 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 S1PR2O95136 353 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 PTTG1O95997 202 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR5AC1P0C628 307 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 LPAR6P43657 344 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 TAS2R31P59538 309 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 SUPT4H1P63272 117 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 CBX3Q13185 183 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 PPP1R1AQ13522 171 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 ZNF585BQ52M93 769 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 SGPP2Q8IWX5 399 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 Q8N6K4 173 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR4S2Q8NH73 311 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 FLYWCH2Q96CP2 140 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 CHIAQ9BZP6 476 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 CUBNO60494 3623 aa14.38□□□□□ -0.11
TRAPPC4-203ENST00000447216 CHST1O43916 411 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 VAMP1P23763 118 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 F2RL1P55085 397 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 SRSF2Q01130 221 aaKnown RBP14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 RGS21Q2M5E4 152 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 TMEM177Q53S58 311 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 TMEM128Q5BJH2 165 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 PLET1Q6UQ28 207 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 HARBI1Q96MB7 349 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 VPREB3Q9UKI3 123 aa14.37□□□□□ -0.11
TRAPPC4-203ENST00000447216 SRRM4A7MD48 611 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 SHOXO15266 292 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR4E1P0C645 316 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 RPA2P15927 270 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 HILS1P60008 231 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 DHODHQ02127 395 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 DHRS7BQ6IAN0 325 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR52B4Q8NGK2 314 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR4C13Q8NGP0 309 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 RBM14Q96PK6 669 aaKnown RBP14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 SLC25A33Q9BSK2 321 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 POMT1Q9Y6A1 747 aa14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 TET2Q6N021 2002 aaPredicted RBP14.36□□□□□ -0.11
TRAPPC4-203ENST00000447216 JMJD1CQ15652 2540 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 INMT-MINDY4F8WBC2 141 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 RBFOX2O43251 390 aaKnown RBP eCLIP14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 IGKV1-39P01597 117 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 IGKV1D-39P04432 117 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 SERPINE2P07093 398 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 UCP1P25874 307 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 TMEM187Q14656 261 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 MMDQ15546 238 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 TRIM16LQ309B1 348 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 C4orf46Q504U0 113 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 VKORC1L1Q8N0U8 176 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 TMEM86BQ8N661 226 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 TCTEX1D1Q8N7M0 179 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 CD300LFQ8TDQ1 290 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 CASTOR1Q8WTX7 329 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 GLYATL2Q8WU03 294 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 ZFAND2BQ8WV99 257 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 GALNT14Q96FL9 552 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 SEC22CQ9BRL7 303 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 TMEM222Q9H0R3 208 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 PLSCR3Q9NRY6 295 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 PITPNC1Q9UKF7 332 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 KCNIP3Q9Y2W7 256 aa14.35□□□□□ -0.11
TRAPPC4-203ENST00000447216 C9orf170A2RU37 121 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 NCBP2LA6PVI3 153 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 TCF21O43680 179 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 GPR137BO60478 399 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 OR2F2O95006 317 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 SFT2D2O95562 160 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 HPRT1P00492 218 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 IFNA2P01563 188 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 IGLV2-23P01705 113 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 UBE2MP61081 183 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 UBA52P62987 128 aaKnown RBP14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 PSG5Q15238 335 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 SSX9Q7RTT3 188 aa14.34□□□□□ -0.11
TRAPPC4-203ENST00000447216 LHFPL5Q8TAF8 219 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms