RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 DFFBO76075 338 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 HPRT1P00492 218 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 OR9G9P0C7N8 305 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 GNG10P50151 68 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 DEFA5Q01523 94 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.36□□□□□ -0.11
SMC6-206ENST00000446852 FAM213BQ8TBF2 198 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 ZDHHC16Q969W1 377 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 LRRC46Q96FV0 321 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 RPUSD1Q9UJJ7 312 aaKnown RBP14.36□□□□□ -0.11
SMC6-206ENST00000446852 GAB2Q9UQC2 676 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 TSPAN15O95858 294 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 ZNF525Q8N782 197 aa14.36□□□□□ -0.11
SMC6-206ENST00000446852 GNPNAT1Q96EK6 184 aaPredicted RBP14.36□□□□□ -0.11
SMC6-206ENST00000446852 PKD1L2Q7Z442 2459 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 TRIM77I1YAP6 450 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 RBFOX2O43251 390 aaKnown RBP eCLIP14.35□□□□□ -0.113e-6■■■■□ 22.3
SMC6-206ENST00000446852 ZG16O60844 167 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 RPL31P62899 125 aaKnown RBP14.35□□□□□ -0.11
SMC6-206ENST00000446852 TMEM14EPQ6UXP3 125 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 VKORC1L1Q8N0U8 176 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 LYG1Q8N1E2 194 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 SUN5Q8TC36 379 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 OR4C12Q96R67 309 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 CTSZQ9UBR2 303 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 CD5P06127 495 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 BTN1A1Q13410 526 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 SPINK9Q5DT21 86 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 SSX9Q7RTT3 188 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 CA5BP1Q8WTZ4 195 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 S1PR3Q99500 378 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 ZNRD1Q9P1U0 126 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 PRELID3BQ9Y3B1 194 aa14.35□□□□□ -0.11
SMC6-206ENST00000446852 IGHV1-69-2A0A0G2JMI3 117 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 C9JQL5 133 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 RNASEK-C17orf49H0YIS7 233 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 RBMXL2O75526 392 aaKnown RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 CCL3L1P16619 93 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 M6PRP20645 277 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 SNCAP37840 140 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 OR2B8PP59922 312 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 C10orf91Q5T1B1 145 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 DTD1Q8TEA8 209 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 RBMXL1Q96E39 390 aaKnown RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 QTRT1Q9BXR0 403 aaKnown RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 UMAD1C9J7I0 102 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 HBG1P69891 147 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 HBG2P69892 147 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 MRPS11P82912 194 aaKnown RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 MEF2CQ06413 473 aaPredicted RBP14.34□□□□□ -0.11
SMC6-206ENST00000446852 GUCA2BQ16661 112 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 SCRT1Q9BWW7 348 aa14.34□□□□□ -0.11
SMC6-206ENST00000446852 FAM157AC9JC47 383 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 F8W036 122 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 IFNA5P01569 189 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 LOXP28300 417 aaPredicted RBP14.33□□□□□ -0.12
SMC6-206ENST00000446852 TMEM30BQ3MIR4 351 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 TMEM200BQ69YZ2 307 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 OR8G2PQ6IF36 304 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 SLC25A48Q6ZT89 311 aaKnown RBP14.33□□□□□ -0.12
SMC6-206ENST00000446852 THNSL2Q86YJ6 484 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 MUC15Q8N387 334 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 SPTBN1Q01082 2364 aaKnown RBP14.33□□□□□ -0.12
SMC6-206ENST00000446852 A0A1B0GV50 99 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 ZNF672Q499Z4 452 aaPredicted RBP14.33□□□□□ -0.12
SMC6-206ENST00000446852 LILRB2Q8N423 598 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 ZNF383Q8NA42 475 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 RSG1Q9BU20 258 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 GAL3ST2Q9H3Q3 398 aa14.33□□□□□ -0.12
SMC6-206ENST00000446852 DVL1P1P54792 670 aaPredicted RBP14.32□□□□□ -0.12
SMC6-206ENST00000446852 SLC38A11Q08AI6 406 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 AARDQ4LEZ3 155 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 SLC25A24Q6NUK1 477 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 H1FXQ92522 213 aaKnown RBP14.32□□□□□ -0.12
SMC6-206ENST00000446852 ZNF714Q96N38 554 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 CARHSP1Q9Y2V2 147 aaKnown RBP14.32□□□□□ -0.12
SMC6-206ENST00000446852 FBXO7Q9Y3I1 522 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 DVL1O14640 695 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 PPIHO43447 177 aaKnown RBP14.32□□□□□ -0.12
SMC6-206ENST00000446852 NDUFB3O43676 98 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 NQO2P16083 231 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 KIR2DS2P43631 304 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 TFF3Q07654 80 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 OR4S2Q8NH73 311 aa14.32□□□□□ -0.12
SMC6-206ENST00000446852 TRAV3A0A0B4J244 114 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 FAM90A9PA6NNJ1 464 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 PMS2P5A8MQ11 134 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 LYNX1G3V0Z9 82 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 F12P00748 615 aaPredicted RBP14.31□□□□□ -0.12
SMC6-206ENST00000446852 SFTA3P0C7M3 94 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 LYNX1P0DP58 116 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 THBS3P49746 956 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 LRRC10Q5BKY1 277 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 HEPN1Q6WQI6 88 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 PUSL1Q8N0Z8 303 aaKnown RBP14.31□□□□□ -0.12
SMC6-206ENST00000446852 SEC11CQ9BY50 192 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 KAAG1Q9UBP8 84 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 CEBPZOSA8MTT3 80 aa14.31□□□□□ -0.12
SMC6-206ENST00000446852 GPR37O15354 613 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms