RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 RBMS2Q15434 407 aaKnown RBP6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 TRIM16LQ309B1 348 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 TMEM30BQ3MIR4 351 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 MIDNQ504T8 468 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 SPAG16Q8N0X2 631 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 CENPSQ8N2Z9 138 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 LINC00311Q8N616 119 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 ESM1Q9NQ30 184 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 ZNF107Q9UII5 783 aaPredicted RBP6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 GPR132Q9UNW8 380 aa6.07□□□□□ -1.44
SF3A3P1-201ENST00000446317 ACANP16112 2415 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 C3orf85A0A1B0GTC6 90 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 NCBP2LA6PVI3 153 aaKnown RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 MPPED1O15442 326 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 VENTXO95231 258 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 OPN1MWP04001 364 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 FBP1P09467 338 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 APELAP0DMC3 54 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 OPN1MW2P0DN77 364 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 OPN1MW3P0DN78 364 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 TMEM11P17152 192 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 G6PCP35575 357 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 THBS3P49746 956 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 RPS16P62249 146 aaKnown RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 GNB1P62873 340 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 SUPT4H1P63272 117 aaKnown RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 EIF4EBP1Q13541 118 aaPredicted RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 LRRC75BQ2VPJ9 315 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 ANKRD55Q3KP44 614 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 SPINK9Q5DT21 86 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 C9orf152Q5JTZ5 239 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 CMTM1Q8IZ96 169 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 LHFPL5Q8TAF8 219 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 ZFAND1Q8TCF1 268 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 PIFOQ8TCI5 191 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 CFHR4Q92496 578 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 MALSU1Q96EH3 234 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 C7orf50Q9BRJ6 194 aaKnown RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 TOLLIPQ9H0E2 274 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 NAA60Q9H7X0 242 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 SLC2A8Q9NY64 477 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 NSG2Q9Y328 171 aa6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 TBL2Q9Y4P3 447 aaKnown RBP6.06□□□□□ -1.44
SF3A3P1-201ENST00000446317 TRAV3A0A0B4J244 114 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 A0A0B4J293 547 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 DNAJC9-AS1A6NH13 148 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 CRYM-AS1A6NIL9 109 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 SRRM4A7MD48 611 aaKnown RBP6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 INMT-MINDY4F8WBC2 141 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 SLC25A17O43808 307 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 CHST1O43916 411 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 SIX6O95475 246 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 KRASP01116 189 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 IGKV1-39P01597 117 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 HLA-AP01891 365 aaKnown RBP6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 APOA2P02652 100 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 IGKV1D-39P04432 117 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 HOXB5P09067 269 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 OR4E1P0C645 316 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 UCP3P55916 312 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 OR2B8PP59922 312 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 PJVKQ0ZLH3 352 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 HABP2Q14520 560 aaPredicted RBP6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 C2orf68Q2NKX9 166 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 ZNF585BQ52M93 769 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 MINOS1Q5TGZ0 78 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 TMEM268Q5VZI3 342 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 PLET1Q6UQ28 207 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 Q6ZS46 218 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 STX12Q86Y82 276 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 ZDHHC22Q8N966 263 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 C8orf31Q8N9H6 132 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 RNASE11Q8TAA1 199 aaKnown RBP6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 EAF1Q96JC9 268 aaPredicted RBP6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 CHIAQ9BZP6 476 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 FBXL15Q9H469 300 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 CDC42EP3Q9UKI2 254 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 WASHC3Q9Y3C0 194 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 NUBP2Q9Y5Y2 271 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 ALG5Q9Y673 324 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 MINOS1-NBL1R4GNA1 71 aa6.05□□□□□ -1.44
SF3A3P1-201ENST00000446317 DOCK11Q5JSL3 2073 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 A0A0G2JRQ6 117 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 C9orf170A2RU37 121 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 FCN1O00602 326 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 ITGB1BP1O14713 200 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 ADAP1O75689 374 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 SNAPINO95295 136 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 F2RP25116 425 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 ARHGDIBP52566 201 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 PLGLAQ15195 96 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 MMDQ15546 238 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 TMEM95Q3KNT9 176 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 C10orf55Q5SWW7 151 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 LPCAT3Q6P1A2 487 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 RBMS3Q6XE24 437 aaKnown RBP6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 LYZL2Q7Z4W2 148 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 SLC25A42Q86VD7 318 aa6.04□□□□□ -1.44
SF3A3P1-201ENST00000446317 SGPP2Q8IWX5 399 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms