RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 SRSF9Q13242 221 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMG1-202ENST00000446231 GATAD1Q8WUU5 269 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 YLPM1P49750 1951 aaKnown RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 ZNF32P17041 273 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 LCN12Q6JVE5 192 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 GABRG3Q99928 467 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 DDX60Q8IY21 1712 aaKnown RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 ACANP16112 2415 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 PEBP1P30086 187 aaKnown RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 GTSF1LQ9H1H1 148 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 OR51B2Q9Y5P1 312 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 RELBQ01201 579 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 LINC00114Q6XXX2 140 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 OR5A2Q8NGI9 324 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 TNRC6CQ9HCJ0 1690 aaKnown RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 C7orf71A4D174 169 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 ADH4P08319 380 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 CD27P26842 260 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 FXYD3Q14802 87 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 FN1P02751 2386 aaKnown RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 IZUMO1RA6ND01 250 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 CEBPDP49716 269 aaPredicted RBP6.77□□□□□ -1.33
SMG1-202ENST00000446231 OR4D5Q8NGN0 318 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 FGF11Q92914 225 aa6.77□□□□□ -1.33
SMG1-202ENST00000446231 LOC389332A0A1B0GUA5 103 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 OR5A1Q8NGJ0 315 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 UBE2ZQ9H832 354 aaPredicted RBP6.76□□□□□ -1.33
SMG1-202ENST00000446231 SNAI2O43623 268 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 ZNF324BQ6AW86 544 aaPredicted RBP6.76□□□□□ -1.33
SMG1-202ENST00000446231 Q6ZWC4 215 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 SCRG1O75711 98 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 CLDN14O95500 239 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 PLSCR2Q9NRY7 297 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 SFXN3Q9BWM7 321 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 GNB4Q9HAV0 340 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 LAMB2P55268 1798 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 ZNF324O75467 553 aaPredicted RBP6.76□□□□□ -1.33
SMG1-202ENST00000446231 SUPT4H1P63272 117 aaKnown RBP6.76□□□□□ -1.33
SMG1-202ENST00000446231 TMEM186Q96B77 213 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 OR10D3Q8NH80 312 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 NGFP01138 241 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 EGR1P18146 543 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 ZNF818PQ6ZRF7 136 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 SERGEFQ9UGK8 458 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 PXMP4Q9Y6I8 212 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 KLF7O75840 302 aaPredicted RBP6.76□□□□□ -1.33
SMG1-202ENST00000446231 LRRC30A6NM36 301 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 HYPMO75409 117 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 LIPFP07098 398 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 CD38P28907 300 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 C5orf17Q8NAS9 161 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 NDFIP1Q9BT67 221 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 SLC25A47Q6Q0C1 308 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 UNQ6494/PRO21346Q6UXR6 183 aa6.76□□□□□ -1.33
SMG1-202ENST00000446231 ERGP11308 486 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 RPL31P62899 125 aaKnown RBP6.75□□□□□ -1.33
SMG1-202ENST00000446231 FOXL1Q12952 345 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 TMEM177Q53S58 311 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 CALHM1Q8IU99 346 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 WDR54Q9H977 334 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 MPDU1O75352 247 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 PRSS12P56730 875 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 FAM27BQ5VT28 67 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 RHBDD2Q6NTF9 364 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 H3BUT2 72 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 SFTPA1Q8IWL2 248 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 PAQR4Q8N4S7 273 aaPredicted RBP6.75□□□□□ -1.33
SMG1-202ENST00000446231 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
SMG1-202ENST00000446231 GAGE12BA1L429 117 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 LILRA1O75019 489 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 MMP23AO75900 390 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 GPHA2Q96T91 129 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 IGHMP01871 453 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 TMEM136Q6ZRR5 245 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 DOLPP1Q86YN1 238 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 PILRAQ9UKJ1 303 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 OPRK1P41145 380 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 PPIAL4DF5H284 164 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 MS4A18H0YCH9 400 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 ORM2P19652 201 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 MS4A18Q3C1V0 323 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 ZNF703Q9H7S9 590 aaPredicted RBP6.75□□□□□ -1.33
SMG1-202ENST00000446231 PSMG4Q5JS54 123 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 STPG1Q5TH74 334 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 VASH2Q86V25 355 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 LILRA5A6NI73 299 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 CRYBB3P26998 211 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 GNB2P62879 340 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 TAF1LQ8IZX4 1826 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 OR4X2Q8NGF9 303 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 HIST1H4GQ99525 98 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 C12orf49Q9H741 205 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 GPR35Q9HC97 309 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 FAM60AQ9NP50 221 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 OR1L8Q8NGR8 309 aa6.75□□□□□ -1.33
SMG1-202ENST00000446231 C10orf113Q5VZT2 155 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 WBP1Q96G27 269 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 CXCL13O43927 109 aa6.74□□□□□ -1.33
SMG1-202ENST00000446231 FTH1P19P0C7X4 201 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms