RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 LEAP2Q969E1 77 aa10.02□□□□□ -0.81
MSH6-204ENST00000445503 LINC00470Q9BZP3 86 aa10.02□□□□□ -0.81
MSH6-204ENST00000445503 OOEPA6NGQ2 149 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 LRRC30A6NM36 301 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 IGKV1-39P01597 117 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 IGKV1D-39P04432 117 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 GPX4P36969 197 aaPredicted RBP10.01□□□□□ -0.81
MSH6-204ENST00000445503 RPL19P84098 196 aaKnown RBP10.01□□□□□ -0.81
MSH6-204ENST00000445503 TOMM20LQ6UXN7 152 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 C1orf210Q8IVY1 113 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 SRD5A3Q9H8P0 318 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 MANBALQ9NQG1 85 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 GTF3C1Q12789 2109 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 SPRY3O43610 288 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 COX5BP10606 129 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 ZNF718Q3SXZ3 478 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 ZNF645Q8N7E2 425 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 MED13Q9UHV7 2174 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 OR7C2O60412 319 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 SOX8P57073 446 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 RPL30P62888 115 aaKnown RBP10.01□□□□□ -0.81
MSH6-204ENST00000445503 MIC13Q5XKP0 118 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 PCNX1Q96RV3 2341 aa10.01□□□□□ -0.81
MSH6-204ENST00000445503 NTN3O00634 580 aaPredicted RBP10□□□□□ -0.81
MSH6-204ENST00000445503 MT-CO2P00403 227 aa10□□□□□ -0.81
MSH6-204ENST00000445503 SNRPCP09234 159 aaKnown RBP10□□□□□ -0.81
MSH6-204ENST00000445503 CEACAM1P13688 526 aa10□□□□□ -0.81
MSH6-204ENST00000445503 CD1BP29016 333 aa10□□□□□ -0.81
MSH6-204ENST00000445503 ATP5G3P48201 142 aa10□□□□□ -0.81
MSH6-204ENST00000445503 GNG10P50151 68 aa10□□□□□ -0.81
MSH6-204ENST00000445503 ZNF585BQ52M93 769 aa10□□□□□ -0.81
MSH6-204ENST00000445503 ABHD12Q8N2K0 398 aa10□□□□□ -0.81
MSH6-204ENST00000445503 WDYHV1Q96HA8 205 aa10□□□□□ -0.81
MSH6-204ENST00000445503 TUBG2Q9NRH3 451 aa10□□□□□ -0.81
MSH6-204ENST00000445503 GRIFINA4D1Z8 144 aa10□□□□□ -0.81
MSH6-204ENST00000445503 PRSS47A8MTI9 375 aa10□□□□□ -0.81
MSH6-204ENST00000445503 PSPNO60542 156 aa10□□□□□ -0.81
MSH6-204ENST00000445503 TMEM183AQ8IXX5 376 aa10□□□□□ -0.81
MSH6-204ENST00000445503 ZPBPQ9BS86 351 aa10□□□□□ -0.81
MSH6-204ENST00000445503 TTC28Q96AY4 2481 aa10□□□□□ -0.81
MSH6-204ENST00000445503 PPIHO43447 177 aaKnown RBP10□□□□□ -0.81
MSH6-204ENST00000445503 TCL1AP56279 114 aa10□□□□□ -0.81
MSH6-204ENST00000445503 ERVFC1-1P60608 527 aa10□□□□□ -0.81
MSH6-204ENST00000445503 SLC35B1P78383 322 aa10□□□□□ -0.81
MSH6-204ENST00000445503 PSG7Q13046 419 aa10□□□□□ -0.81
MSH6-204ENST00000445503 COLCA1Q6ZS62 124 aa10□□□□□ -0.81
MSH6-204ENST00000445503 MBD3L1Q8WWY6 194 aa10□□□□□ -0.81
MSH6-204ENST00000445503 QTRT1Q9BXR0 403 aaKnown RBP10□□□□□ -0.81
MSH6-204ENST00000445503 FKBP11Q9NYL4 201 aa10□□□□□ -0.81
MSH6-204ENST00000445503 MARCH11A6NNE9 402 aa10□□□□□ -0.81
MSH6-204ENST00000445503 IQCJQ1A5X6 159 aa10□□□□□ -0.81
MSH6-204ENST00000445503 KLF14Q8TD94 323 aaPredicted RBP10□□□□□ -0.81
MSH6-204ENST00000445503 CDX2Q99626 313 aaPredicted RBP10□□□□□ -0.81
MSH6-204ENST00000445503 LRFN3Q9BTN0 628 aa10□□□□□ -0.81
MSH6-204ENST00000445503 NPCDR1Q9BY65 106 aa10□□□□□ -0.81
MSH6-204ENST00000445503 RPH3ALQ9UNE2 315 aa10□□□□□ -0.81
MSH6-204ENST00000445503 MPV17P39210 176 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 ZNF83P51522 516 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 CNN1P51911 297 aaKnown RBP9.99□□□□□ -0.81
MSH6-204ENST00000445503 SELENOVP59797 346 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 HAPLN4Q86UW8 402 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 LYG1Q8N1E2 194 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 ANAPC16Q96DE5 110 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 SH2D2AQ9NP31 389 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 CD81P60033 236 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 KRTDAPP60985 99 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 CPAMD8Q8IZJ3 1885 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 IGKV1D-33P01593 117 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 IGKV1-33P01594 117 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 ZNF497Q6ZNH5 498 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 REC114Q7Z4M0 266 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 ATG101Q9BSB4 218 aa9.99□□□□□ -0.81
MSH6-204ENST00000445503 NBASA2RRP1 2371 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 M0R1B8 84 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 AMBPP02760 352 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 OR4P4Q8NGL7 312 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 OR10G8Q8NGN5 311 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 BCL2L2Q92843 193 aaPredicted RBP9.98□□□□□ -0.81
MSH6-204ENST00000445503 CXXC4Q9H2H0 198 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 IFITM10A6NMD0 228 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 FCN1O00602 326 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 NTF3P20783 257 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 Q6ZSR3 168 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 OR13A1Q8NGR1 328 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 MED12LQ86YW9 2145 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 IGKV3D-15A0A087WSY6 115 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 TRAV1-1A0A0B4J248 108 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 C9orf172C9J069 976 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 SMPD2O60906 423 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 IL18BPO95998 194 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 C1QTNF9P0C862 333 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 HSD17B10Q99714 261 aaKnown RBP9.98□□□□□ -0.81
MSH6-204ENST00000445503 CBLN4Q9NTU7 201 aa9.98□□□□□ -0.81
MSH6-204ENST00000445503 TCAPO15273 167 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 ARL14EPLP0DKL9 152 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 PAX5Q02548 391 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 NRN1LQ496H8 165 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 Q6P435 159 aa9.97□□□□□ -0.81
MSH6-204ENST00000445503 TCF23Q7RTU1 214 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms