RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 RITA1Q96K30 269 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 AIFM2Q9BRQ8 373 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 CCL28Q9NRJ3 127 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 TAS2R8Q9NYW2 309 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 METTL1Q9UBP6 276 aaKnown RBP8.57□□□□□ -1.04
HDAC6-211ENST00000443563 KLK11Q9UBX7 282 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 ZNF580Q9UK33 172 aa8.57□□□□□ -1.04
HDAC6-211ENST00000443563 CMYA5Q8N3K9 4069 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 FCGR3BO75015 233 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 IGLV2-14P01704 120 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 OPN1MWP04001 364 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 IGF1P05019 195 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 CSF1P09603 554 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 OPN1MW2P0DN77 364 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 OPN1MW3P0DN78 364 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 VDAC1P21796 283 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 LINC00205P59089 165 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 VMA21Q3ZAQ7 101 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 CMTM1Q8IZ96 169 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 STPG2Q8N412 459 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 MFSD4AQ8N468 514 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 ARRDC1Q8N5I2 433 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 OR4S2Q8NH73 311 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 HSPB9Q9BQS6 159 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 OR51J1Q9H342 316 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 FBXL15Q9H469 300 aa8.56□□□□□ -1.04
HDAC6-211ENST00000443563 DPPA5A6NC42 116 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 GSTZ1O43708 216 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 SLC25A17O43808 307 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 CREBL2O60519 120 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 CRYZL1O95825 349 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 CD3DP04234 171 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 CD28P10747 220 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 PTBP1P26599 531 aaKnown RBP eCLIP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 DGCR2P98153 550 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 TMEM267Q0VDI3 215 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 EIF4EBP1Q13541 118 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 MEF2DQ14814 521 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 PRR31Q5SQ13 230 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 STEAP1BQ6NZ63 245 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 ZNF562Q6V9R5 426 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 ZNF818PQ6ZRF7 136 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 NDUFA11Q86Y39 141 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 TCTEX1D1Q8N7M0 179 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 C11orf44Q8N8P7 122 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 TEX45Q8NA69 505 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 POC5Q8NA72 575 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 VSTM2AQ8TAG5 236 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 CD300LFQ8TDQ1 290 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 NOL4LQ96MY1 436 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 TSSC4Q9Y5U2 329 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-211ENST00000443563 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
HDAC6-211ENST00000443563 IGHV7-81A0A0B4J1V7 117 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 TCRBV4S1A1TA0A5B7 111 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 M0QYG6 137 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 GPR31O00270 319 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 RBFOX2O43251 390 aaKnown RBP eCLIP8.54□□□□□ -1.04
HDAC6-211ENST00000443563 TNFSF12O43508 249 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 RAB3DO95716 219 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 HRASP01112 189 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 CD74P04233 296 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 GNRHRP30968 328 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 ECI1P42126 302 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 UCP3P55916 312 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 UBE2KP61086 200 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 RPL30P62888 115 aaKnown RBP8.54□□□□□ -1.04
HDAC6-211ENST00000443563 SPANXN2Q5MJ10 180 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 TEX38Q6PEX7 206 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 SLC38A6Q8IZM9 456 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 RBMXL1Q96E39 390 aaKnown RBP8.54□□□□□ -1.04
HDAC6-211ENST00000443563 SOSTQ9BQB4 213 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 FXYD6Q9H0Q3 95 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 PARP11Q9NR21 331 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 LINC00527Q9UJ94 153 aa8.54□□□□□ -1.04
HDAC6-211ENST00000443563 LINC01548A6NM66 108 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 DISC1C4P0D8 188 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ATP6V0E1O15342 81 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CNIH1O95406 144 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CA2P00918 260 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 IGLV2-23P01705 113 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ELANEP08246 267 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 AKAIN1P0CW23 69 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CRIP2P52943 208 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CX3CL1P78423 397 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CD83Q01151 205 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 PYDC2Q56P42 97 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 OR2B11Q5JQS5 317 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CXorf66Q5JRM2 361 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-211ENST00000443563 AADACL3Q5VUY0 350 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ZNF329Q86UD4 541 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 SPAG16Q8N0X2 631 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ABHD5Q8WTS1 349 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ZNF486Q96H40 463 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CLCC1Q96S66 551 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-211ENST00000443563 RSRP1Q9BUV0 290 aa8.53□□□□□ -1.04
HDAC6-211ENST00000443563 TINAGL1Q9GZM7 467 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-211ENST00000443563 ZFP57Q9NU63 452 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms