RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 OR5H14A6NHG9 310 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 C9JQL5 133 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 K7ERU9 68 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 TXNDC9O14530 226 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 IFNA7P01567 189 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 TSPAN19P0C672 248 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 PPIBP23284 216 aaKnown RBP3.27□□□□□ -1.89
VPS50-206ENST00000443443 GABRA3P34903 492 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 RPS20P60866 119 aaKnown RBP3.27□□□□□ -1.89
VPS50-206ENST00000443443 ELF3P78545 371 aaPredicted RBP3.27□□□□□ -1.89
VPS50-206ENST00000443443 GNA12Q03113 381 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 LTC4SQ16873 150 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 RNF165Q6ZSG1 346 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 CROCCP2Q86T23 111 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 DCUN1D4Q92564 292 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 C20orf27Q9GZN8 174 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 GTSF1LQ9H1H1 148 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 MED28Q9H204 178 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 PDFQ9HBH1 243 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 KCNIP2Q9NS61 270 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 SLC23A2Q9UGH3 650 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 LAMTOR3Q9UHA4 124 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 NEUROG3Q9Y4Z2 214 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 PLCH2O75038 1416 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 CD109Q6YHK3 1445 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 VWA8A3KMH1 1905 aa3.27□□□□□ -1.89
VPS50-206ENST00000443443 ABCC12Q96J65 1359 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 IGSF9BQ9UPX0 1349 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 TMED7-TICAM2A0A0A6YYA0 188 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 KRBOX1C9JBD0 128 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 GSTZ1O43708 216 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 BANF1O75531 89 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 DEDDO75618 318 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 TNFSF15O95150 251 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 APOMO95445 188 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 CDS2O95674 445 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ZNF682O95780 498 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 HLA-DQB2P05538 268 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 CSN2P05814 226 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 BLVRBP30043 206 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 CMPK1P30085 196 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 PPP1CCP36873 323 aaKnown RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 LHX2P50458 406 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 KLF3P57682 345 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 RRAS2P62070 204 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 TNFAIP6P98066 277 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 EMX2Q04743 252 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 HTR4Q13639 388 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ELOCQ15369 112 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ZNF79Q15937 498 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 RSPO1Q2MKA7 263 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 SGPP2Q8IWX5 399 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ZNF283Q8N7M2 679 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 TSTD1Q8NFU3 115 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 STARD4Q96DR4 205 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 MS4A6EQ96DS6 147 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ABHD14BQ96IU4 210 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 OR2M2Q96R28 347 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 CXorf21Q9HAI6 301 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 GNG8Q9UK08 70 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 DNAJC12Q9UKB3 198 aa3.26□□□□□ -1.89
VPS50-206ENST00000443443 ZNF706Q9Y5V0 76 aaPredicted RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 RIMS1Q86UR5 1692 aaKnown RBP3.26□□□□□ -1.89
VPS50-206ENST00000443443 A0A096LPI6 279 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 C5orf63A6NC05 138 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 H3BSA7 217 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 RGS5O15539 181 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 SERF1AO75920 110 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 SUPT7LO94864 414 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ADRA2AP08913 450 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ZNF806P0C7X5 589 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 PSG2P11465 335 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ZNF25P17030 456 aaPredicted RBP3.25□□□□□ -1.89
VPS50-206ENST00000443443 RPS4Y1P22090 263 aaKnown RBP3.25□□□□□ -1.89
VPS50-206ENST00000443443 CNTFRP26992 372 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ZNF83P51522 516 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 DEFA3P59666 94 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 GRK1Q15835 563 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 RNASE10Q5GAN6 216 aaKnown RBP3.25□□□□□ -1.89
VPS50-206ENST00000443443 TMEM86AQ8N2M4 240 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ACOT12Q8WYK0 555 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 PHYHIPLQ96FC7 376 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ZNF382Q96SR6 550 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 OR2D2Q9H210 308 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 GPR84Q9NQS5 396 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 TAC3Q9UHF0 121 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 U3KQ87 197 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 ROBO3Q96MS0 1386 aa3.25□□□□□ -1.89
VPS50-206ENST00000443443 TMEM131Q92545 1883 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 ZCCHC11Q5TAX3 1644 aaKnown RBP3.24□□□□□ -1.89
VPS50-206ENST00000443443 THSD7BQ9C0I4 1608 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 TRBV19A0A075B6N1 114 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 TMEM72A0PK05 275 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 FAM92AA1XBS5 289 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 C4orf51C9J302 202 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 M0R381 172 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 TRAF3IP2O43734 574 aaPredicted RBP3.24□□□□□ -1.89
VPS50-206ENST00000443443 CD5LO43866 347 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 IGHV3-23P01764 117 aa3.24□□□□□ -1.89
VPS50-206ENST00000443443 S100A8P05109 93 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms