RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 FAM214BQ7L5A3 538 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 TMPRSS7Q7RTY8 843 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 OR5R1Q8NH85 324 aa13.8□□□□□ -0.2
SEMA3B-207ENST00000441915 C17orf112F2Z3M2 114 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 H7BYZ3 331 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 MDKP21741 143 aaPredicted RBP13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 SSTR5P35346 364 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 PLA2G5P39877 138 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 RPS16P62249 146 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 Q6ZR03 302 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 NECAP1Q8NC96 275 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 PRR7Q8TB68 274 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 HSD17B10Q99714 261 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 PRRC2CQ9Y520 2896 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 A8MWP6 167 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 WDR82Q6UXN9 313 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 OR51G1Q8NGK1 321 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 OR4X1Q8NH49 305 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 GAB2Q9UQC2 676 aa13.79□□□□□ -0.2
SEMA3B-207ENST00000441915 MARCH11A6NNE9 402 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 SNRPCP09234 159 aaKnown RBP13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 GALR1P47211 349 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 PMP22Q01453 160 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 VWC2Q2TAL6 325 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 ANKRD39Q53RE8 183 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 PRAMEF6Q5VXH4 476 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 PACRGQ96M98 296 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 PYGO2Q9BRQ0 406 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 CLCF1Q9UBD9 225 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 IGHV3-43A0A0B4J1X8 118 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 LINC00473A8K010 186 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 PPP5D1E7EU14 171 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 TIMM8AO60220 97 aaPredicted RBP13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 IGKV3-15P01624 115 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 TFF1P04155 84 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 IGHV3-43DP0DP04 118 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 TUBG1P23258 451 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 GNB2P62879 340 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 SPINK9Q5DT21 86 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 CNEP1R1Q8N9A8 125 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 RFESDQ8TAC1 157 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 GATAD1Q8WUU5 269 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 TRIB1Q96RU8 372 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 NDUFAF3Q9BU61 184 aa13.78□□□□□ -0.2
SEMA3B-207ENST00000441915 ZNF891A8MT65 544 aaPredicted RBP13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 IFNL4K9M1U5 179 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 RAB4AP20338 218 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 COL10A1Q03692 680 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 SMIM21Q3B7S5 101 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 HES3Q5TGS1 186 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 OR13A1Q8NGR1 328 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 PSG11Q9UQ72 335 aa13.77□□□□□ -0.2
SEMA3B-207ENST00000441915 CDX4O14627 284 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 PAGE4O60829 102 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 AGFG2O95081 481 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 BEND2Q8NDZ0 799 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 ANAPC16Q96DE5 110 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 NOL4LQ96MY1 436 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 HIST1H2BLQ99880 126 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 SMCO3A2RU48 225 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 DEFB108AA8MXU0 73 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 SPINT2O43291 252 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 G0S2P27469 103 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 PCP4P48539 62 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 CDC34P49427 236 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 TNFSF10P50591 281 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 LINC00205P59089 165 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 ACOT6Q3I5F7 207 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 TMEM183AQ8IXX5 376 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 WDR31Q8NA23 367 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 NEIL1Q96FI4 390 aaPredicted RBP13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 METRNQ9UJH8 293 aa13.77□□□□□ -0.21
SEMA3B-207ENST00000441915 MSL2Q9HCI7 577 aa13.76□□□□□ -0.21
SEMA3B-207ENST00000441915 ADH4P08319 380 aa13.76□□□□□ -0.21
SEMA3B-207ENST00000441915 FABP6P51161 128 aa13.76□□□□□ -0.21
SEMA3B-207ENST00000441915 RTP5Q14D33 572 aa13.76□□□□□ -0.21
SEMA3B-207ENST00000441915 FZR1Q9UM11 496 aa13.76□□□□□ -0.21
SEMA3B-207ENST00000441915 HRASP01112 189 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 HTD2P86397 168 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 R3HDM4Q96D70 268 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 ATG101Q9BSB4 218 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 A0A1W2PPQ1 181 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 C11orf94C9JXX5 98 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 VENTXO95231 258 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 GYPAP02724 150 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 SP9P0CG40 484 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 DEFA4P12838 97 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 KITLGP21583 273 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 CD1BP29016 333 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 GCH1P30793 250 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 SOX8P57073 446 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 FAM3BP58499 235 aaPredicted RBP13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 TRAT1Q6PIZ9 186 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 QTRT1Q9BXR0 403 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 TUBG2Q9NRH3 451 aa13.75□□□□□ -0.21
SEMA3B-207ENST00000441915 C15orf62A8K5M9 175 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 GZMHP20718 246 aa13.74□□□□□ -0.21
SEMA3B-207ENST00000441915 FOXF2Q12947 444 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms