RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SSNA1O43805 119 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 APOA2P02652 100 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 RRASP10301 218 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 RPA2P15927 270 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 MC5RP33032 325 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 RTL8BQ17RB0 113 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 SELENOHQ8IZQ5 122 aaKnown RBP16.99■□□□□ 0.31
VPS13B-204ENST00000441350 OR4S2Q8NH73 311 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 IL22RA2Q969J5 263 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 NUP50Q9UKX7 468 aa16.99■□□□□ 0.31
VPS13B-204ENST00000441350 RRAS2P62070 204 aaPredicted RBP16.98■□□□□ 0.31
VPS13B-204ENST00000441350 TMEM268Q5VZI3 342 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 DHRS7BQ6IAN0 325 aaPredicted RBP16.98■□□□□ 0.31
VPS13B-204ENST00000441350 PDPNQ86YL7 162 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 UXS1Q8NBZ7 420 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 RBPMSQ93062 196 aaKnown RBP16.98■□□□□ 0.31
VPS13B-204ENST00000441350 RBMXL1Q96E39 390 aaKnown RBP16.98■□□□□ 0.31
VPS13B-204ENST00000441350 MED28Q9H204 178 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 PLEKHA2Q9HB19 425 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 WASHC3Q9Y3C0 194 aa16.98■□□□□ 0.31
VPS13B-204ENST00000441350 IGHV3-72A0A0B4J1Y9 119 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 A0A0U1RQK1 487 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 S1PR2O95136 353 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 HPRT1P00492 218 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 IGKV1-16P04430 117 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 FOSL1P15407 271 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 C2orf68Q2NKX9 166 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 ZNF695Q8IW36 515 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 TEX29Q8N6K0 151 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 YAE1D1Q9NRH1 226 aa16.97■□□□□ 0.31
VPS13B-204ENST00000441350 SOX21Q9Y651 276 aaPredicted RBP16.97■□□□□ 0.31
VPS13B-204ENST00000441350 H7C2Y5 167 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 CRYZL1O95825 349 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 CD1BP29016 333 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 RAB13P51153 203 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 BCAP31P51572 246 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 LYZL2Q7Z4W2 148 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 SLC35G3Q8N808 338 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 MEGF9Q9H1U4 602 aa16.96■□□□□ 0.31
VPS13B-204ENST00000441350 PIGBOS1A0A0B4J2F0 54 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 SULT1A3P0DMM9 295 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 SULT1A4P0DMN0 295 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 CD99P14209 185 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 HLA-GP17693 338 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 FCN2Q15485 313 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 TMEM177Q53S58 311 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 FAM120AOSQ5T036 256 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 C9orf139Q6ZV77 190 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 SMR3AQ99954 134 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 RAB18Q9NP72 206 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 COMMD9Q9P000 198 aa16.96■□□□□ 0.3
VPS13B-204ENST00000441350 DUXBA0A1W2PPF3 345 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 HMX3A6NHT5 357 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 OR11H7Q8NGC8 314 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 CHAC2Q8WUX2 184 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 SEC22AQ96IW7 307 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 FAM96BQ9Y3D0 163 aa16.95■□□□□ 0.3
VPS13B-204ENST00000441350 HIVEP1P15822 2718 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 FAM90A9PA6NNJ1 464 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 ADAP1O75689 374 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 VENTXO95231 258 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 LY6G6DO95868 133 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 IGKV1-5P01602 117 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 HOXB5P09067 269 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 ARHGDIBP52566 201 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 OR4C13Q8NGP0 309 aa16.94■□□□□ 0.3
VPS13B-204ENST00000441350 OSR1Q8TAX0 266 aaPredicted RBP16.94■□□□□ 0.3
VPS13B-204ENST00000441350 FLYWCH2Q96CP2 140 aaKnown RBP16.94■□□□□ 0.3
VPS13B-204ENST00000441350 MS4A7Q9GZW8 240 aaPredicted RBP16.94■□□□□ 0.3
VPS13B-204ENST00000441350 FBP1P09467 338 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 CXCL3P19876 107 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 VDAC1P21796 283 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 BCL6BQ8N143 479 aaPredicted RBP16.93■□□□□ 0.3
VPS13B-204ENST00000441350 R3HDM4Q96D70 268 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 TMEM160Q9NX00 188 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 MGAT4CQ9UBM8 478 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 TMED3Q9Y3Q3 217 aa16.93■□□□□ 0.3
VPS13B-204ENST00000441350 KRASP01116 189 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 P0C879 139 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 TRAPPC2P0DI81 140 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 TRAPPC2BP0DI82 140 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 NQO2P16083 231 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 BRS3P32247 399 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 G6PCP35575 357 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 DYNLT3P51808 116 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 EBI3Q14213 229 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 POU2AF1Q16633 256 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 NMSQ5H8A3 153 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 GGNBP1Q5YKI7 109 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 OR5M8Q8NGP6 311 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 LSM10Q969L4 123 aaKnown RBP16.92■□□□□ 0.3
VPS13B-204ENST00000441350 RITA1Q96K30 269 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 MARCH11A6NNE9 402 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 SRRM4A7MD48 611 aaKnown RBP16.92■□□□□ 0.3
VPS13B-204ENST00000441350 CCSO14618 274 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 GOSR2O14653 212 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 SHOXO15266 292 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 ATG12O94817 140 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 HRASP01112 189 aa16.92■□□□□ 0.3
VPS13B-204ENST00000441350 THNSL2Q86YJ6 484 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms