RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 PARP12Q9H0J9 701 aaKnown RBP7.58□□□□□ -1.2
HDAC6-209ENST00000440653 MAGT1Q9H0U3 335 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 ESRP2Q9H6T0 727 aaKnown RBP7.58□□□□□ -1.2
HDAC6-209ENST00000440653 UNKLQ9H9P5 680 aaKnown RBP7.58□□□□□ -1.2
HDAC6-209ENST00000440653 WFDC1Q9HC57 220 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 GCM1Q9NP62 436 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.58□□□□□ -1.2
HDAC6-209ENST00000440653 METRNQ9UJH8 293 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 PRELID3BQ9Y3B1 194 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 TIMM9Q9Y5J7 89 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 TLN2Q9Y4G6 2542 aa7.58□□□□□ -1.2
HDAC6-209ENST00000440653 TRAV38-1A0A0B4J264 116 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 C17orf100A8MU93 164 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 SIGLEC5O15389 551 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 S1PR2O95136 353 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 HPRT1P00492 218 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 CD5P06127 495 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 AGAP20933 346 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 CD80P33681 288 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 SNCAP37840 140 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 EDDM3BP56851 147 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 MEF2CQ06413 473 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-209ENST00000440653 BSPH1Q075Z2 132 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 ADIPOQQ15848 244 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 ATP6V1FQ16864 119 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM182Q6ZP80 229 aaPredicted RBP7.57□□□□□ -1.2
HDAC6-209ENST00000440653 H2BFWTQ7Z2G1 175 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 C5orf24Q7Z6I8 188 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 OR2G3Q8NGZ4 309 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 OR4S2Q8NH73 311 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 PINX1Q96BK5 328 aaKnown RBP7.57□□□□□ -1.2
HDAC6-209ENST00000440653 RAB39BQ96DA2 213 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 RBMXL1Q96E39 390 aaKnown RBP7.57□□□□□ -1.2
HDAC6-209ENST00000440653 GAFA1Q96PS6 74 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 GPHA2Q96T91 129 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 GAL3ST2Q9H3Q3 398 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 LINC00574Q9H8X3 128 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 GFOD1Q9NXC2 390 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 PSENENQ9NZ42 101 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 KIAA1456Q9P272 454 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 PSG11Q9UQ72 335 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 TMA7Q9Y2S6 64 aaKnown RBP7.57□□□□□ -1.2
HDAC6-209ENST00000440653 MEGF8Q7Z7M0 2845 aa7.57□□□□□ -1.2
HDAC6-209ENST00000440653 HIVEP2P31629 2446 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 KBTBD11-OT1A0A1B0GTJ5 212 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 hADV38S2A0JD32 116 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 MARCH11A6NNE9 402 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 C3orf80F5H4A9 247 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 HAX1O00165 279 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ST8SIA5O15466 376 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 PPIHO43447 177 aaKnown RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SCO1O75880 301 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM50AO95807 157 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SFTA3P0C7M3 94 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 DUTP33316 252 aaKnown RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 THBS3P49746 956 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 PAX9P55771 341 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 UBE2KP61086 200 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 RPP30P78346 268 aaKnown RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SERF2P84101 59 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF273Q14593 569 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 EFNB3Q15768 340 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 MORN2Q502X0 79 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 KIAA2026Q5HYC2 2103 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 DHRS7BQ6IAN0 325 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ALKBH2Q6NS38 261 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM14EPQ6UXP3 125 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ZNF788Q6ZQV5 615 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 PUSL1Q8N0Z8 303 aaKnown RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 FGFRL1Q8N441 504 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 BOLLQ8N9W6 283 aaKnown RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 UBALD1Q8TB05 177 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 FAM213BQ8TBF2 198 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SCGB1C1Q8TD33 95 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 CORO2AQ92828 525 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
HDAC6-209ENST00000440653 C5orf30Q96GV9 206 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 AGMATQ9BSE5 352 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 TMEM147Q9BVK8 224 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SH3BGRL3Q9H299 93 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 IFI27L2Q9H2X8 130 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 SAP30LQ9HAJ7 183 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 KCNJ16Q9NPI9 418 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 CLN8Q9UBY8 286 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 LINC00312Q9Y6C7 94 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ZANQ9Y493 2812 aa7.56□□□□□ -1.2
HDAC6-209ENST00000440653 ARID1AO14497 2285 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 DYSFO75923 2080 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 IGHV3OR15-7A0A075B7D8 119 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 TRAV1-1A0A0B4J248 108 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 RNASEK-C17orf49H0YIS7 233 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 CST7O76096 145 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 F12P00748 615 aaPredicted RBP7.55□□□□□ -1.2
HDAC6-209ENST00000440653 THBDP07204 575 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 OR4A8P0C604 315 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 NQO2P16083 231 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 ADCYAP1P18509 176 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 OMGP23515 440 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 PAX6P26367 422 aa7.55□□□□□ -1.2
HDAC6-209ENST00000440653 CHRNB4P30926 498 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms