RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RPL30P62888 115 aaKnown RBP11.39□□□□□ -0.59
PCNX3-202ENST00000439247 TPTE2P1Q5T6R2 138 aa11.39□□□□□ -0.59
PCNX3-202ENST00000439247 MRPL14Q6P1L8 145 aaKnown RBP11.39□□□□□ -0.59
PCNX3-202ENST00000439247 SF3B5Q9BWJ5 86 aaKnown RBP11.39□□□□□ -0.59
PCNX3-202ENST00000439247 TMEM106BQ9NUM4 274 aa11.39□□□□□ -0.59
PCNX3-202ENST00000439247 ELOVL5Q9NYP7 299 aa11.39□□□□□ -0.59
PCNX3-202ENST00000439247 DOCK10Q96BY6 2186 aa11.39□□□□□ -0.59
PCNX3-202ENST00000439247 SLC17A3O00476 420 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 YPEL1O60688 119 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 SERF1AO75920 110 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 TGFBR3Q03167 851 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 TRA2AQ13595 282 aaKnown RBP eCLIP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 OR5I1Q13606 314 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 MCEMP1Q8IX19 187 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 YPEL2Q96QA6 119 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 PRDM14Q9GZV8 571 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 ZDHHC11Q9H8X9 412 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 TRAPPC2LQ9UL33 140 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 CEP250Q9BV73 2442 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 PTPRZ1P23471 2315 aaPredicted RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 PMS2P5A8MQ11 134 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 CBR3O75828 277 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 PCP4P48539 62 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 CEBPDP49716 269 aaPredicted RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 EDDM3BP56851 147 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 SOX8P57073 446 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 PCBD1P61457 104 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 COLCA1Q6ZS62 124 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 FAM58AQ8N1B3 248 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 C5orf30Q96GV9 206 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 FAM103A1Q9BTL3 118 aaKnown RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 DNAJC13O75165 2243 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 AHCTF1Q8WYP5 2266 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 DSPP15924 2871 aaKnown RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 ODAMA1E959 279 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 DEGS1O15121 323 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 TFF1P04155 84 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 COX6A1P12074 109 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 MRPS11P82912 194 aaKnown RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 RPS19BP1Q86WX3 136 aaKnown RBP11.38□□□□□ -0.59
PCNX3-202ENST00000439247 TECTBQ96PL2 329 aa11.38□□□□□ -0.59
PCNX3-202ENST00000439247 RBMXL2O75526 392 aaKnown RBP11.37□□□□□ -0.59
PCNX3-202ENST00000439247 S1PR2O95136 353 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 COX5AP20674 150 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 CA6P23280 308 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 HLA-DRB5Q30154 266 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 NUFIP2Q7Z417 695 aaKnown RBP11.37□□□□□ -0.59
PCNX3-202ENST00000439247 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.37□□□□□ -0.59
PCNX3-202ENST00000439247 SPINK4O60575 86 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 CD82P27701 267 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 CDC34P49427 236 aaPredicted RBP11.37□□□□□ -0.59
PCNX3-202ENST00000439247 DEFB124Q8NES8 71 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 IMMP1LQ96LU5 166 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 TMEM147Q9BVK8 224 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 OR2J1Q9GZK6 312 aa11.37□□□□□ -0.59
PCNX3-202ENST00000439247 LIN7CQ9NUP9 197 aaKnown RBP11.37□□□□□ -0.59
PCNX3-202ENST00000439247 LCN2P80188 198 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 OR10P1Q8NGE3 313 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 SFRP2Q96HF1 295 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 OPN3Q9H1Y3 402 aaPredicted RBP11.36□□□□□ -0.59
PCNX3-202ENST00000439247 LOXL2Q9Y4K0 774 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 TIMM9Q9Y5J7 89 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 VENTXO95231 258 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 Q6ZVH6 145 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 MIEN1Q9BRT3 115 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 STRADBQ9C0K7 418 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 SH2D2AQ9NP31 389 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 DEPPQ9NTK1 212 aa11.36□□□□□ -0.59
PCNX3-202ENST00000439247 SPAARA0A1B0GVQ0 90 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 SCO2A0A1W2PP80 73 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 PINLYPA6NC86 204 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 TCF21O43680 179 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 LHX2P50458 406 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 BRWD1-AS2P59051 145 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 C17orf98A8MV24 154 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 TNFSF13O75888 250 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 IL11RAQ14626 422 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 TRIP6Q15654 476 aaKnown RBP11.35□□□□□ -0.59
PCNX3-202ENST00000439247 Q8N7P7 452 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 OCC1Q8TAD7 63 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 DTD1Q8TEA8 209 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 PARD6GQ9BYG4 376 aaPredicted RBP11.35□□□□□ -0.59
PCNX3-202ENST00000439247 OR2D2Q9H210 308 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 COMPP49747 757 aaPredicted RBP11.35□□□□□ -0.59
PCNX3-202ENST00000439247 MMDQ15546 238 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 Q6P435 159 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 SAXO1Q8IYX7 474 aa11.35□□□□□ -0.59
PCNX3-202ENST00000439247 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 LRRC30A6NM36 301 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 GJE1A6NN92 205 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 F6UZH7 168 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 SH2D1BO14796 132 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 KLF7O75840 302 aaPredicted RBP11.34□□□□□ -0.59
PCNX3-202ENST00000439247 OR2H2O95918 312 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 HES3Q5TGS1 186 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
PCNX3-202ENST00000439247 RIMS4Q9H426 269 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms