RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 IFITM3Q01628 133 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 EBI3Q14213 229 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 SLC9A3R2Q15599 337 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 LY6EQ16553 131 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 TBC1D26Q86UD7 250 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 OR8H1Q8NGG4 311 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 OR51H1Q8NH63 302 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 PIFOQ8TCI5 191 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 EAF1Q96JC9 268 aaPredicted RBP8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 C5orf66Q9H5L9 145 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 C1RLQ9NZP8 487 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 VSIG4Q9Y279 399 aa8.47□□□□□ -1.05
HLA-DMB-259ENST00000438510 A6NDX4 124 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 TRIM77I1YAP6 450 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 M0QZK8 103 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 MPPED1O15442 326 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RBFOX2O43251 390 aaKnown RBP eCLIP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 FCGR3BO75015 233 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR2F2O95006 317 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RNASE1P07998 156 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 F2RP25116 425 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 LINC00205P59089 165 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 TAS2R31P59538 309 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RPL15P61313 204 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RPL30P62888 115 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 OR2B11Q5JQS5 317 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMED4Q7Z7H5 227 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 SGPP2Q8IWX5 399 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 SPAG16Q8N0X2 631 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 OSR1Q8TAX0 266 aaPredicted RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 CHAC2Q8WUX2 184 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 FLYWCH2Q96CP2 140 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RBM14Q96PK6 669 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 GPHA2Q96T91 129 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 TSNAXQ99598 290 aaKnown RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RNF5Q99942 180 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 RTBDNQ9BSG5 229 aaPredicted RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 SLC25A33Q9BSK2 321 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 CHIAQ9BZP6 476 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 ESM1Q9NQ30 184 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 TNFRSF19Q9NS68 423 aa8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 FAM212BQ9NTI7 297 aaPredicted RBP8.46□□□□□ -1.06
HLA-DMB-259ENST00000438510 CUBNO60494 3623 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 A0A1B0GVG6 124 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 CRYM-AS1A6NIL9 109 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 H0Y980 276 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 SHOXO15266 292 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 SPDEFO95238 335 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 CRYZL1O95825 349 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 HPRT1P00492 218 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 IGKV1-16P04430 117 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 ANXA3P12429 323 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 BCAP31P51572 246 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 UBE2MP61081 183 aaKnown RBP8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 RPS16P62249 146 aaKnown RBP8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 UBA52P62987 128 aaKnown RBP8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 HNF4GQ14541 408 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 MMDQ15546 238 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM177Q53S58 311 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM219Q86XT9 240 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 Q8N6K4 173 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 HARBI1Q96MB7 349 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 DUX5Q96PT3 197 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 AIFM2Q9BRQ8 373 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 C20orf85Q9H1P6 137 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 NAA60Q9H7X0 242 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 KIAA1456Q9P272 454 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 KCNIP3Q9Y2W7 256 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 MOB4Q9Y3A3 225 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 NUBP2Q9Y5Y2 271 aa8.45□□□□□ -1.06
HLA-DMB-259ENST00000438510 PIGBOS1A0A0B4J2F0 54 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 C3orf85A0A1B0GTC6 90 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 ARPC1BO15143 372 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 NBR2O15453 112 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 FGF16O43320 207 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 GPR137BO60478 399 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 RAMP3O60896 148 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 HRASP01112 189 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 TCRBP04435 133 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 SERPINE2P07093 398 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 RPA2P15927 270 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 AKR1C4P17516 323 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 LGALS7P47929 136 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 TMEM128Q5BJH2 165 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 CCBE1Q6UXH8 406 aaPredicted RBP8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 ADAD2Q8NCV1 583 aaKnown RBP8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 PLEKHA2Q9HB19 425 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 NUDT15Q9NV35 164 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 COMMD9Q9P000 198 aa8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 NIPBLQ6KC79 2804 aaeCLIP8.44□□□□□ -1.06
HLA-DMB-259ENST00000438510 NCBP2LA6PVI3 153 aaKnown RBP8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 CHST1O43916 411 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 PEX14O75381 377 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 ATG12O94817 140 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 CRYBA1P05813 215 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 TRAPPC2P0DI81 140 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 TRAPPC2BP0DI82 140 aa8.43□□□□□ -1.06
HLA-DMB-259ENST00000438510 NQO2P16083 231 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms