RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PTHLHP12272 177 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 THBS3P49746 956 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 LSM3P62310 102 aaKnown RBP6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 SSBP2P81877 361 aaPredicted RBP6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 DCTN2Q13561 401 aaKnown RBP6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 KIAA0141Q14154 515 aaPredicted RBP6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 DEFB136Q30KP8 78 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 GAGE13Q4V321 117 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 HACD4Q5VWC8 232 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 Q6ZS49 121 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 H1FOOQ8IZA3 346 aaPredicted RBP6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 LINC00482Q8N8I6 264 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 TSPAN14Q8NG11 270 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 MYOZ3Q8TDC0 251 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 PHF21AQ96BD5 680 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 OR2D2Q9H210 308 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 OR51J1Q9H342 316 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 SDHAF2Q9NX18 166 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 FAM30AQ9NZY2 134 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 WSB1Q9Y6I7 421 aa6.67□□□□□ -1.34
HERPUD2-206ENST00000438224 A0A087WXM4 84 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 IGKV1D-13A0A0B4J2D9 117 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 M0R1X1 148 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 SOX15O60248 233 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 DIRAS3O95661 229 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 IGLV2-23P01705 113 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 IGHG4P01861 327 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 OR8U9P0C7N5 309 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 IGKV1-13P0DP09 117 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 DTYMKP23919 212 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PSMB8P28062 276 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PPIFP30405 207 aaKnown RBP6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 RPS19P39019 145 aaKnown RBP6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 RANBP1P43487 201 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 MRPS15P82914 257 aaKnown RBP6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 FOXE3Q13461 319 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 KIR2DS1Q14954 304 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PNLIPRP3Q17RR3 467 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 MRGPRG-AS1Q2M3A8 158 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 IDNKQ5T6J7 187 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 COMMD1Q8N668 190 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 KLHL30-AS1Q8NEE0 82 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 OR8U1Q8NH10 309 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 P2RX4Q99571 388 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 ST6GALNAC5Q9BVH7 336 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 KLK15Q9H2R5 256 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PLEKHA2Q9HB19 425 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PARP11Q9NR21 331 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 PPP1R14DQ9NXH3 145 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 ZNF221Q9UK13 617 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 WASHC3Q9Y3C0 194 aa6.66□□□□□ -1.34
HERPUD2-206ENST00000438224 TRAV18A0A075B6X5 111 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 LINC00473A8K010 186 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 B5MCH6 92 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 H7C2Y5 167 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 J3QRK9 145 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 AIREO43918 545 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 TFAP2AP05549 437 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 ELANEP08246 267 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 SERPINB10P48595 397 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 CRIP2P52943 208 aaPredicted RBP6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 NCS1P62166 190 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 SLC35B1P78383 322 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 CX3CL1P78423 397 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 PJVKQ0ZLH3 352 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 PSG5Q15238 335 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 SRSF7Q16629 238 aaKnown RBP eCLIP6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 TEX38Q6PEX7 206 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 ZNF695Q8IW36 515 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 GVQW1Q8N7I0 195 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 OR10J5Q8NHC4 309 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 CASTOR1Q8WTX7 329 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 DDB2Q92466 427 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 NAA50Q9GZZ1 169 aaKnown RBP6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 GNB4Q9HAV0 340 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 SLC35D1Q9NTN3 355 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 ETV7Q9Y603 341 aa6.65□□□□□ -1.34
HERPUD2-206ENST00000438224 TRAV41A0A0B4J266 112 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 SRRM4A7MD48 611 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 UBE2CO00762 179 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 ARPC1BO15143 372 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 SLC25A17O43808 307 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 RBBP9O75884 186 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 IGLV2-14P01704 120 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 FCER2P06734 321 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 CRYGBP07316 175 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 H2AFB1P0C5Y9 115 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 H2AFB2P0C5Z0 115 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 VDAC1P21796 283 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 NFYAP23511 347 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 MC5RP33032 325 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 TALDO1P37837 337 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 CDX1P47902 265 aaPredicted RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 GNG2P59768 71 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 KRTAP10-11P60412 298 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 RPL30P62888 115 aaKnown RBP6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 ECSCRQ19T08 205 aa6.64□□□□□ -1.35
HERPUD2-206ENST00000438224 CXorf66Q5JRM2 361 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms