RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZFP30Q9Y2G7 519 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 HELZP42694 1942 aaKnown RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 MARCH11A6NNE9 402 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 PGLYRP1O75594 196 aaPredicted RBP13.61□□□□□ -0.23
PTPN13-204ENST00000436978 IER3P46695 156 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 OR8A1Q8NGG7 326 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 OR52M1Q8NGK5 317 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 Q96M66 194 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 CBY1Q9Y3M2 126 aa13.61□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF826PQ6ZT77 177 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 TPRX1Q8N7U7 411 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 FAM216AQ8WUB2 273 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 TNFSF10P50591 281 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 DDB2Q92466 427 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 GALNT14Q96FL9 552 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 SOSTQ9BQB4 213 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 CD81P60033 236 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 MIEN1Q9BRT3 115 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 SRSF9Q13242 221 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTPN13-204ENST00000436978 PQLC2Q6ZP29 291 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 FAM186AA6NE01 2351 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 CEBPDP49716 269 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-204ENST00000436978 MUC1P15941 1255 aaPredicted RBP13.6□□□□□ -0.23
PTPN13-204ENST00000436978 GLRXP35754 106 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 C19orf54Q5BKX5 351 aa13.6□□□□□ -0.23
PTPN13-204ENST00000436978 MRPL32Q9BYC8 188 aaKnown RBP13.6□□□□□ -0.23
PTPN13-204ENST00000436978 M0R3E3 92 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 PLA2G10O15496 165 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 ZNF137PP52743 207 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 PHLDA3Q9Y5J5 127 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 C4orf51C9J302 202 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 SELENOHQ8IZQ5 122 aaKnown RBP13.59□□□□□ -0.23
PTPN13-204ENST00000436978 LRRC75AQ8NAA5 344 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 G6PC2Q9NQR9 355 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 FUT9Q9Y231 359 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 TIMP4Q99727 224 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 CHCHD2Q9Y6H1 151 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-204ENST00000436978 PLXND1Q9Y4D7 1925 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 PACRGQ96M98 296 aaPredicted RBP13.59□□□□□ -0.23
PTPN13-204ENST00000436978 HSPB7Q9UBY9 170 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 TNFRSF9Q07011 255 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 OR10J1P30954 320 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 DCAF12L2Q5VW00 463 aa13.59□□□□□ -0.23
PTPN13-204ENST00000436978 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.59□□□□□ -0.23
PTPN13-204ENST00000436978 TANC1Q9C0D5 1861 aa13.58□□□□□ -0.23
PTPN13-204ENST00000436978 M0QZK8 103 aa13.58□□□□□ -0.23
PTPN13-204ENST00000436978 SLC25A17O43808 307 aa13.58□□□□□ -0.23
PTPN13-204ENST00000436978 GGCTO75223 188 aaKnown RBP13.58□□□□□ -0.23
PTPN13-204ENST00000436978 MT-ND6P03923 174 aa13.58□□□□□ -0.23
PTPN13-204ENST00000436978 NPIPB11E5RHQ5 1161 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF207O43670 478 aaKnown RBP13.58□□□□□ -0.24
PTPN13-204ENST00000436978 HCP5Q6MZN7 132 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 FGFRL1Q8N441 504 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 RHOVQ96L33 236 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 SSBP3Q9BWW4 388 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-204ENST00000436978 DNAJC4Q9NNZ3 241 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 SIRT4Q9Y6E7 314 aaPredicted RBP13.58□□□□□ -0.24
PTPN13-204ENST00000436978 ANAPC1Q9H1A4 1944 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 TGIF1Q15583 401 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 RTN4RL2Q86UN3 420 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 MPDZO75970 2070 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 C19orf48Q6RUI8 117 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 OR1N2Q8NGR9 330 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 IBA57Q5T440 356 aaKnown RBP13.58□□□□□ -0.24
PTPN13-204ENST00000436978 AMMECR1LQ6DCA0 310 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 DUX5Q96PT3 197 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 FAM57AQ8TBR7 257 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 TMEM238LA0A1B0GVL6 79 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 A6NJY4 79 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 HSPE1P61604 102 aaKnown RBP13.58□□□□□ -0.24
PTPN13-204ENST00000436978 TUBD1Q9UJT1 453 aa13.58□□□□□ -0.24
PTPN13-204ENST00000436978 C7orf66A4D0T2 115 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 TIAF1O95411 115 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 IGHV3-72A0A0B4J1Y9 119 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 IFT22Q9H7X7 185 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 LINC00862A6NCI5 91 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 PF4P02776 101 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 KCNAB3O43448 404 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 UCP3P55916 312 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 ATP1A1-AS1Q5TC04 95 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 FAM90A1Q86YD7 464 aa13.57□□□□□ -0.24
PTPN13-204ENST00000436978 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-204ENST00000436978 RPS11P62280 158 aaKnown RBP eCLIP13.57□□□□□ -0.24
PTPN13-204ENST00000436978 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.57□□□□□ -0.24
PTPN13-204ENST00000436978 RCC1P18754 421 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 IGKV1D-42A0A075B6H8 117 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 C7orf77A4D0Y5 90 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 CD99P14209 185 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 CENPVQ7Z7K6 275 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 GUCD1Q96NT3 240 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 GPR132Q9UNW8 380 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 CACNA1DQ01668 2161 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 RLFQ13129 1914 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 LOC389332A0A1B0GUA5 103 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 MEOX2P50222 304 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 EAF1Q96JC9 268 aaPredicted RBP13.56□□□□□ -0.24
PTPN13-204ENST00000436978 C17orf51A8MQB3 221 aa13.56□□□□□ -0.24
PTPN13-204ENST00000436978 VSIG10L2P0DP72 767 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms