RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 EDDM3AQ14507 147 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST2H2BEQ16778 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PDLIM3Q53GG5 364 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FFAR4Q5NUL3 377 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GCSAMQ8N6F7 178 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BHQ93079 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 FAM210BQ96KR6 192 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BNQ99877 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HIST1H2BMQ99879 126 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 QTRT1Q9BXR0 403 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 ACTR3CQ9C0K3 210 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 MANBALQ9NQG1 85 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NAT8Q9UHE5 227 aa13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PHOX2AO14813 284 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 IGHV3-13P01766 116 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GPR12P47775 334 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 LOXL3P58215 753 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 LRP11Q86VZ4 500 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SSX3Q99909 188 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NIT2Q9NQR4 276 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 GSN-AS1Q9NRJ2 163 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR6C3Q9NZP0 311 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 WDR83OSQ9Y284 106 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 YIF1AO95070 293 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 HPRT1P00492 218 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OPN1MWP04001 364 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OPN1MW2P0DN77 364 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OPN1MW3P0DN78 364 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PSMB3P49720 205 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 DEFB109BQ30KR1 87 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 C3orf36Q3SXR2 165 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 PPP1R35Q8TAP8 253 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 Q8TCH9 128 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SMIM7Q9BQ49 75 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 OR51M1Q9H341 326 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 NCOR1P1Q9H4R4 102 aa13.34□□□□□ -0.27
HLA-DQB2-231ENST00000435145 SEC14L6B5MCN3 397 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 LHBP01229 141 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 TRGC2P03986 189 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 FABP1P07148 127 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 CGB3P0DN86 165 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 CGB7P0DN87 165 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 TMEM249Q2WGJ8 235 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 FAM180AQ6UWF9 173 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 OR52E5Q8NH55 327 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 RAB24Q969Q5 203 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 IFI27L2Q9H2X8 130 aa13.33□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ITGB1BP1O14713 200 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 NDUFA6P56556 154 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 SPCS3P61009 180 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 HNF4GQ14541 408 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 TMEM241Q24JQ0 296 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 SPRNQ5BIV9 151 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 TIMM23BQ5SRD1 257 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ZNF709Q8N972 641 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 MEGF10Q96KG7 1140 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 PYGO2Q9BRQ0 406 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 GNG12Q9UBI6 72 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 DUSP13Q9UII6 198 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 CACNA1DQ01668 2161 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 C17orf112F2Z3M2 114 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 HMGB3O15347 200 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 FCGR3BO75015 233 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 RBMXL2O75526 392 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 VDAC2P45880 294 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 RPS16P62249 146 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ZNF474Q6S9Z5 364 aaPredicted RBP13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 SPNS3Q6ZMD2 512 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ABHD5Q8WTS1 349 aa13.32□□□□□ -0.28
HLA-DQB2-231ENST00000435145 INTS1Q8N201 2190 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 SOX15O60248 233 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 GLRXP35754 106 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ZNF83P51522 516 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ZNF134P52741 427 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 LTC4SQ16873 150 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 IGFL3Q6UXB1 125 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 DDB2Q92466 427 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 OR2V2Q96R30 315 aa13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 DIDO1Q9BTC0 2240 aaKnown RBP13.31□□□□□ -0.28
HLA-DQB2-231ENST00000435145 IGLV3-9A0A075B6K5 115 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 IGHV3OR15-7A0A075B7D8 119 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 M0R1X1 148 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 PFN1P07737 140 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 S100PP25815 95 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 TMPRSS3P57727 454 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 RPL23P62829 140 aaKnown RBP13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ACOT6Q3I5F7 207 aaPredicted RBP13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 GATAD1Q8WUU5 269 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 S100PBPQ96BU1 408 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
HLA-DQB2-231ENST00000435145 PARLQ9H300 379 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms