RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 SLC9A3R2Q15599 337 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 LYG2Q86SG7 212 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 SSX3Q99909 188 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 SVEP1Q4LDE5 3571 aa18.66■□□□□ 0.58
SMARCAL1-208ENST00000434435 SFT2D2O95562 160 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 CRYZL1O95825 349 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 IFNA2P01563 188 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 IL5P05113 134 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 SNRNP70P08621 437 aaKnown RBP18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 DHRS2Q13268 280 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 SP6Q3SY56 376 aa18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 NSD1Q96L73 2696 aaPredicted RBP18.65■□□□□ 0.58
SMARCAL1-208ENST00000434435 C9orf170A2RU37 121 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 FAM90A9PA6NNJ1 464 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 RAMP3O60896 148 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 IGKV1D-33P01593 117 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 IGKV1-33P01594 117 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 SERPINE2P07093 398 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 UCP1P25874 307 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 BRWD1-AS2P59051 145 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 HES1Q14469 280 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 THNSL2Q86YJ6 484 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 CASTOR1Q8WTX7 329 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 ZNF48Q96MX3 618 aaPredicted RBP18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 TMEM222Q9H0R3 208 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 PRDM13Q9H4Q3 707 aa18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 GPN1Q9HCN4 374 aaPredicted RBP18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 ANK3Q12955 4377 aaKnown RBP18.64■□□□□ 0.57
SMARCAL1-208ENST00000434435 MXRA5Q9NR99 2828 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 IGKV1-16P04430 117 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 FAM106CPP0CH98 169 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 SRPXP78539 464 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 TMEM187Q14656 261 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 TUSC1Q2TAM9 212 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 ZNF585BQ52M93 769 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 Q6YL49 198 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 OR4C13Q8NGP0 309 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 OR2T10Q8NGZ9 312 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 FLYWCH2Q96CP2 140 aaKnown RBP18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 SEC22CQ9BRL7 303 aa18.63■□□□□ 0.57
SMARCAL1-208ENST00000434435 H3BUX3 64 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 HPRT1P00492 218 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 MOSP00540 346 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 RPA2P15927 270 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 CD24P25063 80 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 LPAR6P43657 344 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 EBI3Q14213 229 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 TMEM177Q53S58 311 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 LIAT1Q6ZQX7 453 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 OR52B4Q8NGK2 314 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 OSR1Q8TAX0 266 aaPredicted RBP18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 ZNF431Q8TF32 576 aaPredicted RBP18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 GLYATL2Q8WU03 294 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 HARBI1Q96MB7 349 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 COMMD9Q9P000 198 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 MTORP42345 2549 aa18.62■□□□□ 0.57
SMARCAL1-208ENST00000434435 BTBD17A6NE02 478 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 SHOXO15266 292 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 S1PR2O95136 353 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 DUS4LO95620 317 aaKnown RBP18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 TMEM11P17152 192 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 TATDN3Q17R31 274 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 SIGLECL1Q8N7X8 197 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 OR5R1Q8NH85 324 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 EAF1Q96JC9 268 aaPredicted RBP18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 PLEKHA2Q9HB19 425 aa18.61■□□□□ 0.57
SMARCAL1-208ENST00000434435 PIGBOS1A0A0B4J2F0 54 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 RPS16P62249 146 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 RBMS3Q6XE24 437 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 LGI3Q8N145 548 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 COQ8AQ8NI60 647 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 PIFOQ8TCI5 191 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 SSMEM1Q8WWF3 244 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 RBMXL1Q96E39 390 aaKnown RBP18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 RNF5Q99942 180 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 PRR13Q9NZ81 148 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 PITPNC1Q9UKF7 332 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 TCF19Q9Y242 345 aa18.6■□□□□ 0.57
SMARCAL1-208ENST00000434435 SNRPGP15A8MWD9 76 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 CREBL2O60519 120 aaPredicted RBP18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 CRLF1O75462 422 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 CDS2O95674 445 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 HRASP01112 189 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 IGHV4-59P01825 116 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 IER3P46695 156 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 ANKRD55Q3KP44 614 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 TMEM268Q5VZI3 342 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 ZNF695Q8IW36 515 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 RBPMSQ93062 196 aaKnown RBP18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 IL22RA2Q969J5 263 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 TSNAXQ99598 290 aaKnown RBP18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 PHB2Q99623 299 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 AIFM2Q9BRQ8 373 aa18.59■□□□□ 0.57
SMARCAL1-208ENST00000434435 A0A0B4J293 547 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 ATG12O94817 140 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 FAM157CP0CG43 387 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 NQO2P16083 231 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 LGALS7P47929 136 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 ERVK-16P61578 105 aa18.58■□□□□ 0.56
SMARCAL1-208ENST00000434435 HNF4GQ14541 408 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms