RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 SEC16AO15027 2179 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 SDHAF1A6NFY7 115 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 CHP2O43745 196 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 NEFHP12036 1026 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 COL8A2P25067 703 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 HSD11B1P28845 292 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 CCR2P41597 374 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 EMX1Q04741 257 aaPredicted RBP1.37□□□□□ -2.19
PTPN4-205ENST00000433888 BIKQ13323 160 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 PMAIP1Q13794 54 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 KCNJ8Q15842 424 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 IGFBP7Q16270 282 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 RGS21Q2M5E4 152 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 FAM201AQ5SY85 155 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 FAM78BQ5VT40 261 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 SYPL2Q5VXT5 272 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 AMMECR1LQ6DCA0 310 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 AMTNQ6UX39 209 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 Q6ZQT7 251 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 ZNF550Q7Z398 422 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 LYZL2Q7Z4W2 148 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 GPHB5Q86YW7 130 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 SLC35B4Q969S0 331 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 GNPNAT1Q96EK6 184 aaPredicted RBP1.37□□□□□ -2.19
PTPN4-205ENST00000433888 C1QTNF6Q9BXI9 259 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 FKBP14Q9NWM8 211 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 MRPL16Q9NX20 251 aaKnown RBP1.37□□□□□ -2.19
PTPN4-205ENST00000433888 ANGPT4Q9Y264 503 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 PRELID3BQ9Y3B1 194 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 FIS1Q9Y3D6 152 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 SNAPC4Q5SXM2 1469 aa1.37□□□□□ -2.19
PTPN4-205ENST00000433888 OTOFQ9HC10 1997 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 A0A087WUJ7 227 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 IGHV3-73A0A0B4J1V6 119 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 FAM236DA0A1B0GTK5 79 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 OR11H12B2RN74 326 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 CPSF4O95639 269 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 FAM228BP0C875 321 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 FAM236CP0DP71 79 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 CCL3P10147 92 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 DEFA4P12838 97 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 G0S2P27469 103 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 HOXA6P31267 233 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 CD200P41217 278 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 OMPP47874 163 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 SULT1A1P50225 295 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 TAS2R45P59539 299 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 RPS20P60866 119 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 FGF12P61328 243 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 RPL30P62888 115 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 PSG4Q00888 419 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 SRSF6Q13247 344 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 CST6Q15828 149 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 FAM173BQ6P4H8 233 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 ZNF322Q6U7Q0 402 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 NT5DC3Q86UY8 548 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 OR10P1Q8NGE3 313 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 OR1L8Q8NGR8 309 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 OR11H2Q8NH07 326 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 SGMS2Q8NHU3 365 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 LHFPL5Q8TAF8 219 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 CD200R1Q8TD46 325 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 IMP4Q96G21 291 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 PRAP1Q96NZ9 151 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 ERMAPQ96PL5 475 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 ULBP3Q9BZM4 244 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 RNASE7Q9H1E1 156 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 C14orf105Q9NVL8 296 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 PAQR5Q9NXK6 330 aaPredicted RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 VPS29Q9UBQ0 182 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 MCTS1Q9ULC4 181 aaKnown RBP1.36□□□□□ -2.19
PTPN4-205ENST00000433888 MMACHCQ9Y4U1 282 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 ZNF407Q9C0G0 2248 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 COL18A1P39060 1754 aa1.36□□□□□ -2.19
PTPN4-205ENST00000433888 THSD7AQ9UPZ6 1657 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 MAP3K5Q99683 1374 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 RALGAPA2Q2PPJ7 1873 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 DOCK5Q9H7D0 1870 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 HECW2Q9P2P5 1572 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 A0A1B0GU33 70 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 A8MUN3 132 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 I3L521 148 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 LST1O00453 97 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 KPNA3O00505 521 aaPredicted RBP1.35□□□□□ -2.19
PTPN4-205ENST00000433888 PLA2G10O15496 165 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 SYNGR2O43760 224 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 APOMO95445 188 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 KRT75O95678 551 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 MT-CO2P00403 227 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 SERPINA1P01009 418 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 CTSGP08311 255 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 CD7P09564 240 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 TFPTP0C1Z6 253 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 CPMP14384 443 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 ALOX5APP20292 161 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 CRHBPP24387 322 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 LPAR6P43657 344 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 CAPZBP47756 277 aa1.35□□□□□ -2.19
PTPN4-205ENST00000433888 MARCKSL1P49006 195 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms