RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 TRAV17A0A0B4J275 112 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 C15orf62A8K5M9 175 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 WNT9BO14905 357 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 CECR9P0C854 216 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 CDC34P49427 236 aaPredicted RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 ADIRFQ15847 76 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 BEND4Q6ZU67 534 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 C16orf82Q7Z2V1 217 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 OR13A1Q8NGR1 328 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 R3HDM4Q96D70 268 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 IMMP2LQ96T52 175 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 SLC25A22Q9H936 323 aa11.39□□□□□ -0.59
COL6A3-207ENST00000433762 ZMAT5Q9UDW3 170 aaKnown RBP11.39□□□□□ -0.59
COL6A3-207ENST00000433762 FRYLO94915 3013 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 LINC00473A8K010 186 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 AHRRA9YTQ3 701 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 SRRM5B3KS81 715 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 F6UZH7 168 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 TMPRSS2O15393 492 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 SOD3P08294 240 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
COL6A3-207ENST00000433762 LCN2P80188 198 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 ZNF826PQ6ZT77 177 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 VASH2Q86V25 355 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 TMEM183AQ8IXX5 376 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 SNX22Q96L94 193 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 PFDN5Q99471 154 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 F2RL2O00254 374 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 MGST3O14880 152 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 GGCTO75223 188 aaKnown RBP11.38□□□□□ -0.59
COL6A3-207ENST00000433762 Q8N7P7 452 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 OR10D4PQ8NGN7 298 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 OR6C3Q9NZP0 311 aa11.38□□□□□ -0.59
COL6A3-207ENST00000433762 IGHV2OR16-5A0A0B4J2B6 119 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 TRGV8A0A0C4DH27 118 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 CD55P08174 381 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 CD1BP29016 333 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 OPRK1P41145 380 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 GPR12P47775 334 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 TFF3Q07654 80 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 FOXF2Q12947 444 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 Q3ZCU0 254 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 OR2B11Q5JQS5 317 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 GCNT2Q8N0V5 402 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.37□□□□□ -0.59
COL6A3-207ENST00000433762 GTF3C1Q12789 2109 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 DMDP11532 3685 aa11.37□□□□□ -0.59
COL6A3-207ENST00000433762 ATXN7O15265 892 aaPredicted RBP11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PRDX2P32119 198 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 SSTR5P35346 364 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 GALR1P47211 349 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PDLIM4P50479 330 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 FAM209BQ5JX69 171 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PRAMEF6Q5VXH4 476 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 OR4F5Q8NH21 305 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 OR4X1Q8NH49 305 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 ZDHHC16Q969W1 377 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 GPR61Q9BZJ8 451 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PSG11Q9UQ72 335 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 DVL1O14640 695 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 IFNA10P01566 189 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 RAB7AP51149 207 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 ERVK-16P61578 105 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 TMEM30BQ3MIR4 351 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 MORN2Q502X0 79 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 ATP1A1-AS1Q5TC04 95 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 BTNL3Q6UXE8 466 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 CISD2Q8N5K1 135 aaKnown RBP11.36□□□□□ -0.59
COL6A3-207ENST00000433762 CD177Q8N6Q3 437 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 CNEP1R1Q8N9A8 125 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 C9orf106Q8NAJ2 232 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 LRRC29Q8WV35 223 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 PARD6AQ9NPB6 346 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 KNTC1P50748 2209 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 WDFY3Q8IZQ1 3526 aa11.36□□□□□ -0.59
COL6A3-207ENST00000433762 TRAV20A0A0B4J274 112 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 FNDC10F2Z333 226 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 GYPAP02724 150 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 PMP22Q01453 160 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 KCNIP4Q6PIL6 250 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 TMEM170AQ8WVE7 144 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 S100PBPQ96BU1 408 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 RPUSD4Q96CM3 377 aaKnown RBP11.35□□□□□ -0.59
COL6A3-207ENST00000433762 ZNF71Q9NQZ8 489 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-207ENST00000433762 CFAP54Q96N23 3096 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 C11orf94C9JXX5 98 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 PRSS46E5RG02 174 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 RBMXL2O75526 392 aaKnown RBP11.35□□□□□ -0.59
COL6A3-207ENST00000433762 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-207ENST00000433762 TMPRSS7Q7RTY8 843 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 CXorf67Q86X51 503 aaPredicted RBP11.35□□□□□ -0.59
COL6A3-207ENST00000433762 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
COL6A3-207ENST00000433762 HCFC1P51610 2035 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 IGHV1-18A0A0C4DH31 117 aa11.34□□□□□ -0.59
COL6A3-207ENST00000433762 ST8SIA5O15466 376 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms