RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 SLC35B1P78383 322 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 ELF3P78545 371 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 AESQ08117 197 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 MADCAM1Q13477 382 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 RIPK1Q13546 671 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 HLA-DRB5Q30154 266 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 Q499Y3 187 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 DMRTC1Q5HYR2 192 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 C6orf183Q5T699 404 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 ASCL4Q6XD76 172 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 RDH10Q8IZV5 341 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 OSR2Q8N2R0 312 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 DHRSXQ8N5I4 330 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 MS4A15Q8N5U1 240 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 NKAIN3Q8N8D7 197 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 C8orf31Q8N9H6 132 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 OR51D1Q8NGF3 324 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 OR8H1Q8NGG4 311 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 OR52N1Q8NH53 320 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 CNIH3Q8TBE1 160 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 TNFAIP8L1Q8WVP5 186 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 RASL10AQ92737 203 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 TOMM40LQ969M1 308 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 SMIM19Q96E16 107 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 CHST6Q9GZX3 395 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 C5orf66Q9H5L9 145 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 LINC00574Q9H8X3 128 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 GPN1Q9HCN4 374 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 CNOT2Q9NZN8 540 aaKnown RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 DIMT1Q9UNQ2 313 aaKnown RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 FOXJ3Q9UPW0 622 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 HILPDAQ9Y5L2 63 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 TSSC4Q9Y5U2 329 aaPredicted RBP4.31□□□□□ -1.72
HDAC9-213ENST00000433709 SMAD5-AS1Q9Y6J3 95 aa4.31□□□□□ -1.72
HDAC9-213ENST00000433709 NOTCH3Q9UM47 2321 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 TMEM30CPA0ZSE6 113 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 SLC33A1O00400 549 aaPredicted RBP4.3□□□□□ -1.72
HDAC9-213ENST00000433709 MYL12BO14950 172 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 FGF16O43320 207 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 IGLV1-47P01700 117 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 TFF1P04155 84 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 UBBP0CG47 229 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 GPR183P32249 361 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 CAPGP40121 348 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 SLC35A2P78381 396 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 CDK5R1Q15078 307 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 TPTE2P1Q5T6R2 138 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 DDI2Q5TDH0 399 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 LHFPL4Q7Z7J7 247 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 C8orf59Q8N0T1 100 aaPredicted RBP4.3□□□□□ -1.72
HDAC9-213ENST00000433709 LYG1Q8N1E2 194 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 OR5AU1Q8NGC0 362 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 OR52I1Q8NGK6 324 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 OR4P4Q8NGL7 312 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 OR10X1Q8NGY0 326 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 PIFOQ8TCI5 191 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 NEK7Q8TDX7 302 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 FAM192AQ9GZU8 254 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 CST11Q9H112 138 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 VCX3BQ9H321 246 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 SCN3BQ9NY72 215 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 CALYQ9NYX4 217 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 IDI2-AS1Q9NZ38 188 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 KCNIP1Q9NZI2 227 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 MGAT4AQ9UM21 535 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 ING4Q9UNL4 249 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 ST3GAL6Q9Y274 331 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 ERGIC3Q9Y282 383 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 VPS13CQ709C8 3753 aa4.3□□□□□ -1.72
HDAC9-213ENST00000433709 TCRBV4S1A1TA0A5B7 111 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 H3BSH0 61 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR7C1O76099 320 aaPredicted RBP4.29□□□□□ -1.72
HDAC9-213ENST00000433709 LIMS3P0CW19 117 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 LIMS4P0CW20 117 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR5H8P0DN80 308 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 NFYBP25208 207 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 PSMA1P25786 263 aaKnown RBP4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR3A4PP47883 348 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 PSMD7P51665 324 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 SNU13P55769 128 aaKnown RBP4.29□□□□□ -1.72
HDAC9-213ENST00000433709 RBM11P57052 281 aaKnown RBP4.29□□□□□ -1.72
HDAC9-213ENST00000433709 ZNF816Q0VGE8 651 aaPredicted RBP4.29□□□□□ -1.72
HDAC9-213ENST00000433709 GPR50Q13585 617 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 HES1Q14469 280 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 TRAM1Q15629 374 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 LRRC37A5PQ49AS3 106 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 GLT8D1Q68CQ7 371 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 Q6P435 159 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 UNQ9370/PRO34162Q6UXP9 181 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 BATF2Q8N1L9 274 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 LINC00311Q8N616 119 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 TPRX1Q8N7U7 411 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR51A4Q8NGJ6 313 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR5D18Q8NGL1 313 aa4.29□□□□□ -1.72
HDAC9-213ENST00000433709 OR2T10Q8NGZ9 312 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 232 ms